RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 STOML2Q9UJZ1 356 aa15.93■□□□□ 0.14
SDC3-203ENST00000471567 LUC7L2Q9Y383 392 aaKnown RBP15.93■□□□□ 0.14
SDC3-203ENST00000471567 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 TRUB2O95900 331 aaKnown RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 GBP1P32455 592 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 OPRD1P41143 372 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 MATKP42679 507 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 KLHL30Q0D2K2 578 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 EIF4EBP2Q13542 120 aaPredicted RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 CCINQ13939 588 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 TRIM14Q14142 442 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 FAM102AQ5T9C2 384 aaPredicted RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 SPECC1LQ69YQ0 1117 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 SARM1Q6SZW1 724 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 MMS22LQ6ZRQ5 1243 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 DTWD2Q8NBA8 298 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 SLC30A5Q8TAD4 765 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 SLC39A13Q96H72 371 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 FCRL2Q96LA5 508 aaPredicted RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 IRX2Q9BZI1 471 aaPredicted RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 HAUS4Q9H6D7 363 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 SEPT11Q9NVA2 429 aaKnown RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 HCN4Q9Y3Q4 1203 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 BZW2Q9Y6E2 419 aaKnown RBP15.92■□□□□ 0.14
SDC3-203ENST00000471567 KMT2EQ8IZD2 1858 aa15.92■□□□□ 0.14
SDC3-203ENST00000471567 IRAK2O43187 625 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 GALR2O43603 387 aaPredicted RBP15.91■□□□□ 0.14
SDC3-203ENST00000471567 GRAP2O75791 330 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 GYPCP04921 128 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 CALB1P05937 261 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 SLC11A2P49281 568 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 GSCP56915 257 aaPredicted RBP15.91■□□□□ 0.14
SDC3-203ENST00000471567 C1QBPQ07021 282 aaKnown RBP15.91■□□□□ 0.14
SDC3-203ENST00000471567 PTP4A2Q12974 167 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 ANO4Q32M45 955 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 FBXO43Q4G163 708 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 PREPLQ4J6C6 727 aaPredicted RBP15.91■□□□□ 0.14
SDC3-203ENST00000471567 ADGRF1Q5T601 910 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 E4F1Q66K89 784 aaPredicted RBP15.91■□□□□ 0.14
SDC3-203ENST00000471567 ACAD10Q6JQN1 1059 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 FSTL4Q6MZW2 842 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 MAMSTRQ6ZN01 415 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 VSTM4Q8IW00 320 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 ETFBKMTQ8IXQ9 262 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 CCDC26Q8TAB7 109 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 ADAM32Q8TC27 787 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 CPLX3Q8WVH0 158 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 PNKPQ96T60 521 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 C11orf70Q9BRQ4 267 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 BBS2Q9BXC9 721 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 CHRDQ9H2X0 955 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
SDC3-203ENST00000471567 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.91■□□□□ 0.14
SDC3-203ENST00000471567 ADAM22Q9P0K1 906 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 TMEM59LQ9UK28 342 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 STAP1Q9ULZ2 295 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 MIA3Q5JRA6 1907 aa15.91■□□□□ 0.14
SDC3-203ENST00000471567 A0A0A0MRY4 1105 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 GOLGA8SH3BPF8 625 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 CACNG3O60359 315 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 ACSL4O60488 711 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 CYBBP04839 570 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 SLC2A3P11169 496 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 RNASE9P60153 205 aaKnown RBP15.9■□□□□ 0.14
SDC3-203ENST00000471567 MTA1Q13330 715 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 C2CD6Q53TS8 623 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 TPGS1Q6ZTW0 290 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 ZNF571Q7Z3V5 609 aaPredicted RBP15.9■□□□□ 0.14
SDC3-203ENST00000471567 OLIG1Q8TAK6 271 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 NT5C3BQ969T7 300 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 VCPIP1Q96JH7 1222 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 XPO6Q96QU8 1125 aaKnown RBP15.9■□□□□ 0.14
SDC3-203ENST00000471567 NPY6RQ99463 290 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 DDX50Q9BQ39 737 aaKnown RBP15.9■□□□□ 0.14
SDC3-203ENST00000471567 RBSNQ9H1K0 784 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 FAM204AQ9H8W3 233 aa15.9■□□□□ 0.14
SDC3-203ENST00000471567 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.9■□□□□ 0.14
SDC3-203ENST00000471567 ARIH1Q9Y4X5 557 aaPredicted RBP15.9■□□□□ 0.14
SDC3-203ENST00000471567 NEDD8-MDP1E9PL57 170 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 GFRA2O00451 464 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 TULP3O75386 442 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 F9P00740 461 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 PENKP01210 267 aaPredicted RBP15.89■□□□□ 0.13
SDC3-203ENST00000471567 APOEP02649 317 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 SERPING1P05155 500 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 GZMAP12544 262 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 TYRP14679 529 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 COL9A1P20849 921 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 CASP14P31944 242 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 SLC6A11P48066 632 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
SDC3-203ENST00000471567 SLC25A52Q3SY17 297 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 MPPE1Q53F39 396 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 HGSNATQ68CP4 663 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 NAIF1Q69YI7 327 aaPredicted RBP15.89■□□□□ 0.13
SDC3-203ENST00000471567 MON1BQ7L1V2 547 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 C12orf40Q86WS4 652 aa15.89■□□□□ 0.13
SDC3-203ENST00000471567 PGAP3Q96FM1 320 aaPredicted RBP15.89■□□□□ 0.13
SDC3-203ENST00000471567 RBM12Q9NTZ6 932 aaKnown RBP15.89■□□□□ 0.13
SDC3-203ENST00000471567 DDIT4Q9NX09 232 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms