RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 BRD3Q15059 726 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 PDK2Q15119 407 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 CLUL1Q15846 466 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 SLC9A4Q6AI14 798 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 MON1AQ86VX9 555 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 RFX6Q8HWS3 928 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 TP53INP2Q8IXH6 220 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 CCDC105Q8IYK2 499 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 CCDC33Q8N5R6 958 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 C2orf15Q8WU43 125 aaKnown RBP8.65□□□□□ -1.02
GTF3A-206ENST00000470606 HNRNPLLQ8WVV9 542 aaKnown RBP8.65□□□□□ -1.02
GTF3A-206ENST00000470606 ZBTB9Q96C00 473 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 ERP44Q9BS26 406 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 TMEM121Q9BTD3 319 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 TTLL2Q9BWV7 592 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
GTF3A-206ENST00000470606 DPH5Q9H2P9 285 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 SMOC2Q9H3U7 446 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 ABCC13Q9NSE7 274 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 GRHL1Q9NZI5 618 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 NEU3Q9UQ49 428 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 SHROOM3Q8TF72 1996 aa8.65□□□□□ -1.02
GTF3A-206ENST00000470606 HIDE1A8MVS5 230 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 URODP06132 367 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 AMPD1P23109 780 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 KLRC2P26717 231 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 TNFRSF8P28908 595 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 PPM1AP35813 382 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 BMPR1AP36894 532 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 GBE1Q04446 702 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 BYSLQ13895 437 aaKnown RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 DHX34Q14147 1143 aaKnown RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 SHHQ15465 462 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 TRIP13Q15645 432 aaPredicted RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 BTBD8Q5XKL5 378 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 DRICH1Q6PGQ1 229 aaPredicted RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ZDHHC24Q6UX98 284 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 TMEM150AQ86TG1 271 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 PHOSPHO2Q8TCD6 241 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 IFT81Q8WYA0 676 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 DPF3Q92784 378 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 NKD2Q969F2 451 aaPredicted RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 FBXO32Q969P5 355 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 NTAN1Q96AB6 310 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ABHD8Q96I13 439 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 SLC9A7Q96T83 725 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ZNF670Q9BS34 389 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 FUT8Q9BYC5 575 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 TKTL2Q9H0I9 626 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 FBXO44Q9H4M3 255 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 CCSER2Q9H7U1 834 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 FAM204AQ9H8W3 233 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 CYP4F11Q9HBI6 524 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 RXFP1Q9HBX9 757 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ARHGEF4Q9NR80 690 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ZDHHC18Q9NUE0 388 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 SNX24Q9Y343 169 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 YIPF1Q9Y548 306 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 PCDHB12Q9Y5F1 795 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 APOC4-APOC2K7ER74 178 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 TGM5O43548 720 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 APOC2P02655 101 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 IRS1P35568 1242 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 MAGEA10P43363 369 aaPredicted RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 KRT17Q04695 432 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 DPYSQ14117 519 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 KRT81Q14533 505 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 TPGS2Q68CL5 300 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 NCBP2-AS2Q69YL0 99 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 LILRA6Q6PI73 481 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 C1orf228Q6PIY5 440 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 MAATS1Q7Z4T9 603 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 VSIG1Q86XK7 387 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ATL2Q8NHH9 583 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 CCDC26Q8TAB7 109 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 SPPL3Q8TCT6 385 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 RNF139Q8WU17 664 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 SLC39A13Q96H72 371 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 WDCPQ9H6R7 721 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 MRPL17Q9NRX2 175 aaKnown RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 ARHGEF38Q9NXL2 777 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 MAGED2Q9UNF1 606 aaPredicted RBP8.64□□□□□ -1.03
GTF3A-206ENST00000470606 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
GTF3A-206ENST00000470606 FAM187AA6NFU0 413 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 KCNU1A8MYU2 1149 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 ZNF487B1APH4 448 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 RTN3O95197 1032 aaPredicted RBP8.63□□□□□ -1.03
GTF3A-206ENST00000470606 RARGP13631 454 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 CTNNB1P35222 781 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 RPL10AP62906 217 aaKnown RBP8.63□□□□□ -1.03
GTF3A-206ENST00000470606 NOMO1Q15155 1222 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 ODF2Q5BJF6 829 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 UBAP2Q5T6F2 1119 aaKnown RBP8.63□□□□□ -1.03
GTF3A-206ENST00000470606 ZC3H18Q86VM9 953 aaKnown RBP8.63□□□□□ -1.03
GTF3A-206ENST00000470606 PSTKQ8IV42 348 aaKnown RBP8.63□□□□□ -1.03
GTF3A-206ENST00000470606 UNC45BQ8IWX7 931 aa8.63□□□□□ -1.03
GTF3A-206ENST00000470606 IFT20Q8IY31 132 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms