RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 GJB4Q9NTQ9 266 aa3.99□□□□□ -1.77
SSB-208ENST00000468600 ZIM2Q9NZV7 527 aa3.99□□□□□ -1.77
SSB-208ENST00000468600 PCDHA12Q9UN75 941 aa3.99□□□□□ -1.77
SSB-208ENST00000468600 NOTCH3Q9UM47 2321 aa3.99□□□□□ -1.77
SSB-208ENST00000468600 C16orf96A6NNT2 1141 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 ACOT8O14734 319 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 CTIFO43310 598 aaKnown RBP3.98□□□□□ -1.77
SSB-208ENST00000468600 CA12O43570 354 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 EPN2O95208 641 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 HRGP04196 525 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 MYBP10242 640 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 ZKSCAN1P17029 563 aaPredicted RBP3.98□□□□□ -1.77
SSB-208ENST00000468600 TBXAS1P24557 533 aaPredicted RBP3.98□□□□□ -1.77
SSB-208ENST00000468600 NTSR1P30989 418 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 HILS1P60008 231 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 ACOX1Q15067 660 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 INPP5JQ15735 1006 aaPredicted RBP3.98□□□□□ -1.77
SSB-208ENST00000468600 MINDY4Q4G0A6 757 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 GRHL2Q6ISB3 625 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 FBXL22Q6P050 247 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 TFAP2DQ7Z6R9 452 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 FBXL14Q8N1E6 418 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 SDR16C5Q8N3Y7 309 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 SLC44A5Q8NCS7 719 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 TMEM255BQ8WV15 326 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 ASB5Q8WWX0 329 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 APIPQ96GX9 242 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 FAM204AQ9H8W3 233 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 PAPOLBQ9NRJ5 636 aaKnown RBP3.98□□□□□ -1.77
SSB-208ENST00000468600 RXFP3Q9NSD7 469 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 DECR2Q9NUI1 292 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 ARL8BQ9NVJ2 186 aa3.98□□□□□ -1.77
SSB-208ENST00000468600 SIRT4Q9Y6E7 314 aaPredicted RBP3.98□□□□□ -1.77
SSB-208ENST00000468600 TRBV5-3A0A0A0MS03 114 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 SLC22A23A1A5C7 686 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 F8W810 466 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 WDR47O94967 919 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 FGF3P11487 239 aaPredicted RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 MYF5P13349 255 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 DUSP1P28562 367 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 TNFRSF8P28908 595 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 IDUAP35475 653 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 DGKQP52824 942 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 ANAPC15P60006 121 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 KCNJ12Q14500 433 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 KCNAB1Q14722 419 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 POLD3Q15054 466 aaPredicted RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 AASDHQ4L235 1098 aaPredicted RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 CUZD1Q86UP6 607 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 SESTD1Q86VW0 696 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 SUN3Q8TAQ9 357 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 LRTOMTQ8WZ04 291 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 PIGKQ92643 395 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 MSI2Q96DH6 328 aaKnown RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 NTPCRQ9BSD7 190 aaKnown RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 SCNM1Q9BWG6 230 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 MSRB1Q9NZV6 116 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 ERRFI1Q9UJM3 462 aaPredicted RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 AGO2Q9UKV8 859 aaKnown RBP3.97□□□□□ -1.77
SSB-208ENST00000468600 OGDHLQ9ULD0 1010 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 HPSEQ9Y251 543 aa3.97□□□□□ -1.77
SSB-208ENST00000468600 SPATA31A5Q5VU36 1347 aa3.96□□□□□ -1.77
SSB-208ENST00000468600 SPATA31A7Q8IWB4 1347 aa3.96□□□□□ -1.77
SSB-208ENST00000468600 hCG_2014768A0A024R1R8 64 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 PRPF4O43172 522 aaKnown RBP eCLIP3.96□□□□□ -1.78
SSB-208ENST00000468600 RPL17P18621 184 aaKnown RBP3.96□□□□□ -1.78
SSB-208ENST00000468600 TFEBP19484 476 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 KCNJ4P48050 445 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 CARSP49589 748 aaKnown RBP3.96□□□□□ -1.78
SSB-208ENST00000468600 FAM102BQ5T8I3 360 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 RNF220Q5VTB9 566 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 NXNQ6DKJ4 435 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 RFX8Q6ZV50 586 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 UNC13DQ70J99 1090 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 SRGAP1Q7Z6B7 1085 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 PRR11Q96HE9 360 aaPredicted RBP3.96□□□□□ -1.78
SSB-208ENST00000468600 MED30Q96HR3 178 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 ARHGAP39Q9C0H5 1083 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 ZNF287Q9HBT7 754 aa3.96□□□□□ -1.78
SSB-208ENST00000468600 ZNF335Q9H4Z2 1342 aaPredicted RBP3.95□□□□□ -1.78
SSB-208ENST00000468600 A0A0G2JK05 382 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 A6NNZ2 444 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 LINC01565O15544 149 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 CBFA2T3O75081 653 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 ATG13O75143 517 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 NDUFB8O95169 186 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 HOXD12P35452 270 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 POLD2P49005 469 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 RAE1P78406 368 aaKnown RBP3.95□□□□□ -1.78
SSB-208ENST00000468600 PPATQ06203 517 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 CHST15Q7LFX5 561 aaPredicted RBP3.95□□□□□ -1.78
SSB-208ENST00000468600 TMPRSS12Q86WS5 348 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 UEVLDQ8IX04 471 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 FSTL5Q8N475 847 aaPredicted RBP3.95□□□□□ -1.78
SSB-208ENST00000468600 WDR24Q96S15 920 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 STRBPQ96SI9 672 aaKnown RBP3.95□□□□□ -1.78
SSB-208ENST00000468600 SENP7Q9BQF6 1050 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 ABHD10Q9NUJ1 306 aa3.95□□□□□ -1.78
SSB-208ENST00000468600 ITGB1BP2Q9UKP3 347 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms