RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MAN2A1Q16706 1144 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 FAM187BQ17R55 369 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 FBXO47Q5MNV8 452 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 FKBP15Q5T1M5 1219 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 PIK3R6Q5UE93 754 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 NOTUMQ6P988 496 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 SLC27A1Q6PCB7 646 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CRELD2Q6UXH1 353 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 ETV3LQ6ZN32 361 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 ARHGAP36Q6ZRI8 547 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 LRRC8DQ7L1W4 858 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 APBB1IPQ7Z5R6 666 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 NLGN4XQ8N0W4 816 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 AHI1Q8N157 1196 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CAGE1Q8TC20 777 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 SH3RF2Q8TEC5 729 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 MZB1Q8WU39 189 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CPA5Q8WXQ8 436 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 LPPQ93052 612 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 ACAP3Q96P50 834 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 FNBP1Q96RU3 617 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 ADAM2Q99965 735 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 ORAI3Q9BRQ5 295 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CRACR2AQ9BSW2 395 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CCDC94Q9BW85 323 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 SEZ6LQ9BYH1 1024 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 NFKBIZQ9BYH8 718 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CDT1Q9H211 546 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 NDST4Q9H3R1 872 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 HIPK3Q9H422 1215 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CNTD2Q9H8S5 307 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 METTL14Q9HCE5 456 aaKnown RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 KIAA1586Q9HCI6 787 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 PDE11AQ9HCR9 933 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 PTPRHQ9HD43 1115 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 ERVK-5Q9HDB9 667 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 TOPORSQ9NS56 1045 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 RBAKQ9NYW8 714 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 PLA2G2DQ9UNK4 145 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 MAPRE3Q9UPY8 281 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 HES2Q9Y543 173 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 MROH7Q68CQ1 1323 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 CNTNAP2Q9UHC6 1331 aa4.39□□□□□ -1.71
TMEM39A-204ENST00000468545 A0A1B0GUA9 196 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 TRIM43BA6NCK2 446 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 LRRIQ3A6PVS8 624 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 CBX4O00257 560 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MAN2B1O00754 1011 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 KIAA0391O15091 583 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MGEA5O60502 916 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 NBNO60934 754 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 RPLP2P05387 115 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 KRT19P08727 400 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 CLTAP09496 248 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MED14OSP0DP75 135 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 CXCL8P10145 99 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MYCLP1P12525 358 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 ACTN1P12814 892 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 NCAM1P13591 858 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 PFKLP17858 780 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 SLC9A1P19634 815 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 PROZP22891 400 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 GLDCP23378 1020 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 GJA4P35212 333 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MASP1P48740 699 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 FMO5P49326 533 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MECP2P51608 486 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 GUCY2FP51841 1108 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 CDR1P51861 262 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 JAM2P57087 298 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 TFAMQ00059 246 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 APBA1Q02410 837 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 PPP3CAQ08209 521 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 GOLGA8FQ08AF8 430 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 GOLGA8DPQ0D2H9 430 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 BFSP1Q12934 665 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 TUSC3Q13454 348 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 BIRC3Q13489 604 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 SYCP1Q15431 976 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 NFIL3Q16649 462 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 DCAF4L1Q3SXM0 396 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 MIIPQ5JXC2 388 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 UBXN11Q5T124 520 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 ZNF648Q5T619 568 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 SARM1Q6SZW1 724 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 GBP6Q6ZN66 633 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 EP400NLQ6ZTU2 488 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 SYDE1Q6ZW31 735 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 INTS8Q75QN2 995 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 ANKRD33Q7Z3H0 272 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 RPAINQ86UA6 219 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 RTN4RL1Q86UN2 441 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 OSTM1Q86WC4 334 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 PTRH1Q86Y79 214 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 THNSL2Q86YJ6 484 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 C12orf56Q8IXR9 622 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 ZC3H3Q8IXZ2 948 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 CHST14Q8NCH0 376 aa4.38□□□□□ -1.71
TMEM39A-204ENST00000468545 BHLHE22Q8NFJ8 381 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms