RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TBC1D3IA0A087WXS9 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3EA0A087X179 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3KA0A087X1G2 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 A0A1W2PPH5 198 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3BA6NDS4 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3FA6NER0 549 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3LB9A6J9 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 YY2O15391 372 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 PROM1O43490 865 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 PMPCBO75439 489 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 LARGE1O95461 756 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CNPP09543 421 aaKnown RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 C1SP09871 688 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3HP0C7X1 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CD19P15391 556 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 ENGP17813 658 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 FPR3P25089 353 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CTGFP29279 349 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 GKP32189 559 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CASP6P55212 293 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 RPL15P61313 204 aaKnown RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 PSG6Q00889 435 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CLCA4Q14CN2 919 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 ANKRD1Q15327 319 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 SPATS1Q496A3 300 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TIGD2Q4W5G0 525 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 FBLN7Q53RD9 439 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 SLC45A4Q5BKX6 768 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 SPDYAQ5MJ70 313 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 HAUS3Q68CZ6 603 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3CQ6IPX1 549 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 SLC22A25Q6T423 547 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBC1D3Q8IZP1 549 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CACTINQ8WUQ7 758 aaKnown RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 SDCCAG3Q96C92 435 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 KTI12Q96EK9 354 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 Q96MF0 132 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 AIFM2Q9BRQ8 373 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 CENPOQ9BU64 300 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 OSBPL5Q9H0X9 879 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TTYH1Q9H313 450 aaPredicted RBP4.61□□□□□ -1.67
VPS13A-209ENST00000467124 NRDE2Q9H7Z3 1164 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 USP29Q9HBJ7 922 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 PREBQ9HCU5 417 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 SLC2A4RGQ9NR83 387 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 TBCCD1Q9NVR7 557 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 BAG5Q9UL15 447 aa4.61□□□□□ -1.67
VPS13A-209ENST00000467124 C1QTNF3-AMACRE9PGA6 284 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 KIAA0355O15063 1070 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 SPTLC2O15270 562 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 PRAMEF2O60811 474 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RNASEH2AO75792 299 aaKnown RBP4.6□□□□□ -1.67
VPS13A-209ENST00000467124 TFRCP02786 760 aaKnown RBP4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ACP5P13686 325 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ZNF20P17024 532 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 MAN1A1P33908 653 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 GRK5P34947 590 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RXRGP48443 463 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RCAN1P53805 252 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 TPTEP56180 551 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 NXPH1P58417 271 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 EFR3AQ14156 821 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 TSTQ16762 297 aaKnown RBP4.6□□□□□ -1.67
VPS13A-209ENST00000467124 CTXN3Q4LDR2 81 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 UBAP2Q5T6F2 1119 aaKnown RBP4.6□□□□□ -1.67
VPS13A-209ENST00000467124 L1TD1Q5T7N2 865 aaKnown RBP4.6□□□□□ -1.67
VPS13A-209ENST00000467124 VWA1Q6PCB0 445 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RINLQ6ZS11 566 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 BBS12Q6ZW61 710 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RHOUQ7L0Q8 258 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ARHGEF19Q8IW93 802 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 LNX2Q8N448 690 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 GALNT4Q8N4A0 578 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 SLC44A3Q8N4M1 653 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ANKRD44Q8N8A2 993 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 FSIP1Q8NA03 581 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 CTHRC1Q96CG8 243 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ZBTB10Q96DT7 871 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RSPRY1Q96DX4 576 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 RNF125Q96EQ8 232 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 VPS50Q96JG6 964 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 PLEKHG4BQ96PX9 1271 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 CHCHD6Q9BRQ6 235 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ALG8Q9BVK2 526 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ELOVL1Q9BW60 279 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 WDR11Q9BZH6 1224 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 UNC45AQ9H3U1 944 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 KCTD5Q9NXV2 234 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 MGAT4CQ9UBM8 478 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 ST3GAL5Q9UNP4 418 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 CAMK2AQ9UQM7 478 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 SH2B3Q9UQQ2 575 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 CNPY2Q9Y2B0 182 aa4.6□□□□□ -1.67
VPS13A-209ENST00000467124 SUV39H1O43463 412 aa4.59□□□□□ -1.67
VPS13A-209ENST00000467124 PEX1O43933 1283 aa4.59□□□□□ -1.67
VPS13A-209ENST00000467124 FOXD2O60548 495 aaPredicted RBP4.59□□□□□ -1.67
VPS13A-209ENST00000467124 GFPT2O94808 682 aa4.59□□□□□ -1.67
VPS13A-209ENST00000467124 RTN3O95197 1032 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms