RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 KIF26AQ9ULI4 1882 aaPredicted RBP16.77■□□□□ 0.27
COL16A1-207ENST00000466829 CFAP54Q96N23 3096 aa16.77■□□□□ 0.27
COL16A1-207ENST00000466829 EP300Q09472 2414 aaPredicted RBP16.77■□□□□ 0.27
COL16A1-207ENST00000466829 EIF3CLB5ME19 914 aaKnown RBP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 K7EQS6 105 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 AXIN1O15169 862 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 RPP40O75818 363 aaKnown RBP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 NDUFA10O95299 355 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 APBB3O95704 486 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 ZBED1O96006 694 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 HMBSP08397 361 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 FERP16591 822 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 TIE1P35590 1138 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 EIF2DP41214 584 aaKnown RBP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 PRKCIP41743 596 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 GRIA2P42262 883 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 ID4P47928 161 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 YWHAGP61981 247 aaKnown RBP eCLIP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 KRT83P78385 493 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 APBA1Q02410 837 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 PDE4CQ08493 712 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 BST2Q10589 180 aaKnown RBP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 EFEMP1Q12805 493 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 ASIC2Q16515 512 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 GAB4Q2WGN9 574 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 TPGS1Q6ZTW0 290 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 ENOSF1Q7L5Y1 443 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 C12orf40Q86WS4 652 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 SIX6OS1Q8N1H7 587 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 C17orf53Q8N3J3 647 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 TSTD1Q8NFU3 115 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 USP33Q8TEY7 942 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 CCDC42Q96M95 316 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 EIF3CQ99613 913 aaKnown RBP16.76■□□□□ 0.27
COL16A1-207ENST00000466829 BBS2Q9BXC9 721 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 CLIC5Q9NZA1 410 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 DEC1Q9P2X7 70 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 USP3Q9Y6I4 520 aa16.76■□□□□ 0.27
COL16A1-207ENST00000466829 NEDD8-MDP1E9PL57 170 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 KIF2AO00139 706 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-207ENST00000466829 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
COL16A1-207ENST00000466829 RETP07949 1114 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 DGKEP52429 567 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 MFAP3P55082 362 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 COG7P83436 770 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 RAPGEF1Q13905 1077 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-207ENST00000466829 HGSNATQ68CP4 663 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 TOGARAM2Q6ZUX3 1019 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 IRF2BP2Q7Z5L9 587 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 REXO1L1PQ8IX06 675 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 GAB3Q8WWW8 586 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 BHMTQ93088 406 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 XPO6Q96QU8 1125 aaKnown RBP16.75■□□□□ 0.27
COL16A1-207ENST00000466829 ULBP1Q9BZM6 244 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 UBE2TQ9NPD8 197 aaPredicted RBP16.75■□□□□ 0.27
COL16A1-207ENST00000466829 ARHGAP20Q9P2F6 1191 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 WDR35Q9P2L0 1181 aa16.75■□□□□ 0.27
COL16A1-207ENST00000466829 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 TULP2O00295 520 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 HOXC11O43248 304 aaPredicted RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 TULP3O75386 442 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 IPO7O95373 1038 aaKnown RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 KLF8O95600 359 aaPredicted RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 PAEPP09466 180 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 SETSIPP0DME0 302 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 KRT5P13647 590 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 LCP1P13796 627 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 SOX5P35711 763 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 TNFRSF4P43489 277 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 MRPS21P82921 87 aaKnown RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 SPEM2Q0P670 501 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 ADIGQ0VDE8 80 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 SFTPA1Q8IWL2 248 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 ALLCQ8N6M5 410 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 TXNDC5Q8NBS9 432 aaKnown RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 RNF139Q8WU17 664 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 NDRG1Q92597 394 aaKnown RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 KAT5Q92993 513 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 PPP1R13BQ96KQ4 1090 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 DNAJC17Q9NVM6 304 aaKnown RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
COL16A1-207ENST00000466829 MARCH2Q9P0N8 246 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 MYH10P35580 1976 aa16.74■□□□□ 0.27
COL16A1-207ENST00000466829 GPR179Q6PRD1 2367 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 SLC12A8A0AV02 714 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 F8VZ95 297 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 M0QYV0 167 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 O00370 1275 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 STC2O76061 302 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 ALDH1A2O94788 518 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 GFPT2O94808 682 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 LCA5LO95447 670 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 TYRP14679 529 aa16.73■□□□□ 0.27
COL16A1-207ENST00000466829 BRD2P25440 801 aaKnown RBP16.73■□□□□ 0.27
COL16A1-207ENST00000466829 EIF4A3P38919 411 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms