RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 APOBEC3GQ9HC16 384 aaKnown RBP12.54□□□□□ -0.4
GTF3A-205ENST00000466776 OLA1Q9NTK5 396 aaKnown RBP12.54□□□□□ -0.4
GTF3A-205ENST00000466776 DNAAF2Q9NVR5 837 aaKnown RBP12.54□□□□□ -0.4
GTF3A-205ENST00000466776 MARCH2Q9P0N8 246 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 HPSEQ9Y251 543 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 NFE2L3Q9Y4A8 694 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
GTF3A-205ENST00000466776 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
GTF3A-205ENST00000466776 A0A1B0GTW7 788 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 HYAL3O43820 417 aaPredicted RBP12.53□□□□□ -0.4
GTF3A-205ENST00000466776 EPB41P11171 864 aaKnown RBP12.53□□□□□ -0.4
GTF3A-205ENST00000466776 MFAP3P55082 362 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
GTF3A-205ENST00000466776 PKP1Q13835 747 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 EDRF1Q3B7T1 1238 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 FUT11Q495W5 492 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 SCD5Q86SK9 330 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 CPXM2Q8N436 756 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 FBXL13Q8NEE6 735 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 CADM4Q8NFZ8 388 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 ZCCHC14Q8WYQ9 949 aaKnown RBP12.53□□□□□ -0.4
GTF3A-205ENST00000466776 PRCCQ92733 491 aaPredicted RBP12.53□□□□□ -0.4
GTF3A-205ENST00000466776 GATA6Q92908 595 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 PLD4Q96BZ4 506 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 SLC2A11Q9BYW1 496 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 CD248Q9HCU0 757 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 THAP10Q9P2Z0 257 aaPredicted RBP12.53□□□□□ -0.4
GTF3A-205ENST00000466776 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 MAPK8IP1Q9UQF2 711 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 IGF2RP11717 2491 aa12.53□□□□□ -0.4
GTF3A-205ENST00000466776 SLC12A8A0AV02 714 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 CETN3O15182 167 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 TIMM44O43615 452 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 HMBSP08397 361 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 NCAM1P13591 858 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 IL12RB1P42701 662 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 HARS2P49590 506 aaKnown RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 DPYDQ12882 1025 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 IL27RAQ6UWB1 636 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 PIGZQ86VD9 579 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 DENND1CQ8IV53 801 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 SIPA1Q96FS4 1042 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 TOE1Q96GM8 510 aaKnown RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 GPR174Q9BXC1 333 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 TMEM121BQ9BXQ6 578 aaPredicted RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 CIPCQ9C0C6 399 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 ITM2CQ9NQX7 267 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 CISHQ9NSE2 258 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 WSB2Q9NYS7 404 aaPredicted RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 AGO1Q9UL18 857 aaKnown RBP12.52□□□□□ -0.41
GTF3A-205ENST00000466776 TMEM131Q92545 1883 aa12.52□□□□□ -0.41
GTF3A-205ENST00000466776 PTPRBP23467 1997 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 WASH3PC4AMC7 463 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 CER1O95813 267 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 ZBED1O96006 694 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 KLKB1P03952 638 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 CD59P13987 128 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 TKTL1P51854 596 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 NDUFA8P51970 172 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 BCAT1P54687 386 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 GRIK2Q13002 908 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 ENPP2Q13822 863 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 ZNF234Q14588 700 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 TRIP6Q15654 476 aaKnown RBP12.51□□□□□ -0.41
GTF3A-205ENST00000466776 GEN1Q17RS7 908 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 SERPINA13PQ6UXR4 307 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 TMPRSS6Q8IU80 811 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 NAXDQ8IW45 347 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 ANKRD52Q8NB46 1076 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 SLC4A11Q8NBS3 891 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 RNF139Q8WU17 664 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 DNASE2BQ8WZ79 361 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
GTF3A-205ENST00000466776 TSG101Q99816 390 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 MIR1-1HGQ9H1L0 117 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 SLC6A17Q9H1V8 727 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 RMND1Q9NWS8 449 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 ELOVL2Q9NXB9 296 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 KLK13Q9UKR3 277 aa12.51□□□□□ -0.41
GTF3A-205ENST00000466776 APOBEC2Q9Y235 224 aaKnown RBP12.51□□□□□ -0.41
GTF3A-205ENST00000466776 HBS1LQ9Y450 684 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms