RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CALM2P0DP24 149 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 CALM3P0DP25 149 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 HNF1BP35680 557 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 ALDH1A3P47895 512 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 LIMS1P48059 325 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 NAPAP54920 295 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 LAMTOR4Q0VGL1 99 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 TFDP1Q14186 410 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 PDGFRLQ15198 375 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 PLEKHG6Q3KR16 790 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 SYCP2LQ5T4T6 812 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 GPR158Q5T848 1215 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 SLC27A1Q6PCB7 646 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 CYB5R4Q7L1T6 521 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 RALYLQ86SE5 291 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 TMPRSS12Q86WS5 348 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 FMNL3Q8IVF7 1028 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 TMTC2Q8N394 836 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 SRBD1Q8N5C6 995 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 RNF149Q8NC42 400 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 MDGA1Q8NFP4 955 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 OLIG1Q8TAK6 271 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 PRPF31Q8WWY3 499 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 BRF1Q92994 677 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 MED8Q96G25 268 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 PGBD1Q96JS3 809 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 UROC1Q96N76 676 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 GCNAQ96QF7 691 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 FNBP1Q96RU3 617 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 RIT2Q99578 217 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 PAAF1Q9BRP4 392 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 NXF3Q9H4D5 531 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 FSCN3Q9NQT6 498 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 CEP72Q9P209 647 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 AFF4Q9UHB7 1163 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 SRPK3Q9UPE1 567 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 ASB3Q9Y575 518 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 ATXN2Q99700 1313 aaKnown RBP6.39□□□□□ -1.39
NCL-208ENST00000466274 CELSR3Q9NYQ7 3312 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 PTPN13Q12923 2485 aa6.39□□□□□ -1.39
NCL-208ENST00000466274 IGLV3-22A0A075B6J6 115 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 SMCO2A6NFE2 343 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 hCG_1984214I3L0E3 225 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 INO80B-WBP1J3KQ70 363 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 HIP1O00291 1037 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 FFAR3O14843 346 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 CHMP2AO43633 222 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 MARCH6O60337 910 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 SEC24AO95486 1093 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 NPTXRO95502 500 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 TP53P04637 393 aaPredicted RBP6.38□□□□□ -1.39
NCL-208ENST00000466274 CDK4P11802 303 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 TKTP29401 623 aaKnown RBP6.38□□□□□ -1.39
NCL-208ENST00000466274 MAPKAPK2P49137 400 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 PMS1P54277 932 aaKnown RBP6.38□□□□□ -1.39
NCL-208ENST00000466274 ZNF445P59923 1031 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 SEMG2Q02383 582 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 ZNF33AQ06730 810 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 MXD4Q14582 209 aaPredicted RBP6.38□□□□□ -1.39
NCL-208ENST00000466274 CRY1Q16526 586 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 PRR16Q569H4 304 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 HLA-DQA1Q5Y7H0 255 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 PCSK4Q6UW60 755 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 IL27RAQ6UWB1 636 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 ITIH5Q86UX2 942 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 JAMLQ86YT9 394 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 ZNF654Q8IZM8 581 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 CPA6Q8N4T0 437 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 ZNF713Q8N859 430 aaPredicted RBP6.38□□□□□ -1.39
NCL-208ENST00000466274 RLN3Q8WXF3 142 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 FGF11Q92914 225 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 CD101Q93033 1021 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 CPB2Q96IY4 423 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 LRRC3BQ96PB8 259 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 CEP89Q96ST8 783 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 TEKT3Q9BXF9 490 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 EBF3Q9H4W6 596 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 TASP1Q9H6P5 420 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 MINDY3Q9H8M7 445 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 PRDM16Q9HAZ2 1276 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 LUC7LQ9NQ29 371 aaKnown RBP6.38□□□□□ -1.39
NCL-208ENST00000466274 PLA2G2DQ9UNK4 145 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 PAXBP1Q9Y5B6 917 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 TEX15Q9BXT5 2789 aa6.38□□□□□ -1.39
NCL-208ENST00000466274 FAM149AA5PLN7 773 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 PLK4O00444 970 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 SYN3O14994 580 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 FLRT2O43155 660 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 TNFSF14O43557 240 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 GJB3O75712 270 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CER1O95813 267 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 PRKCBP05771 671 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 ZNF883P0CG24 379 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 JUPP14923 745 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 SDSP20132 328 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 IGFBP6P24592 240 aaPredicted RBP6.37□□□□□ -1.39
NCL-208ENST00000466274 CDC25CP30307 473 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms