RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
PHC3-201ENST00000465896 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
PHC3-201ENST00000465896 AGO1Q9UL18 857 aaKnown RBP12.78□□□□□ -0.36
PHC3-201ENST00000465896 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
PHC3-201ENST00000465896 MGAQ8IWI9 3026 aa12.78□□□□□ -0.36
PHC3-201ENST00000465896 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
PHC3-201ENST00000465896 TRABD2BA6NFA1 517 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 MEI4A8MW99 385 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 C10orf142B7Z368 130 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 EXOC3O60645 756 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 PHACTR2O75167 634 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 C1QL1O75973 258 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 HLA-EP13747 358 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 GNSP15586 552 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 ACSL1P33121 698 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 RDXP35241 583 aaKnown RBP12.77□□□□□ -0.37
PHC3-201ENST00000465896 PLA2G4AP47712 749 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 CLDN6P56747 220 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 CYP4F3Q08477 520 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 SV2AQ7L0J3 742 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 CCDC186Q7Z3E2 898 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 ADAM32Q8TC27 787 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 SETD7Q8WTS6 366 aaKnown RBP12.77□□□□□ -0.37
PHC3-201ENST00000465896 TMEM174Q8WUU8 243 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 LRIG1Q96JA1 1093 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 CUEDC2Q9H467 287 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.37
PHC3-201ENST00000465896 PCDHGB2Q9Y5G2 931 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 SNX11Q9Y5W9 270 aa12.77□□□□□ -0.37
PHC3-201ENST00000465896 FLNBO75369 2602 aaKnown RBP12.77□□□□□ -0.37
PHC3-201ENST00000465896 SPTLC2O15270 562 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 PPP6R2O75170 966 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 HLA-DRAP01903 254 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 PRB1P04280 392 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 HMBSP08397 361 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 FAM200BP0CF97 657 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 CORO1AP31146 461 aaKnown RBP12.76□□□□□ -0.37
PHC3-201ENST00000465896 MATKP42679 507 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 PPP1R26Q5T8A7 1209 aaPredicted RBP12.76□□□□□ -0.37
PHC3-201ENST00000465896 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 ZNF366Q8N895 744 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 NDRG1Q92597 394 aaKnown RBP12.76□□□□□ -0.37
PHC3-201ENST00000465896 CYFIP2Q96F07 1278 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 SIPA1Q96FS4 1042 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 ELOVL2Q9NXB9 296 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 LSM7Q9UK45 103 aaKnown RBP12.76□□□□□ -0.37
PHC3-201ENST00000465896 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.76□□□□□ -0.37
PHC3-201ENST00000465896 PCDHA5Q9Y5H7 936 aa12.76□□□□□ -0.37
PHC3-201ENST00000465896 A0A087WV48 116 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 PDCP20941 246 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 HOXD9P28356 352 aaPredicted RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 SGSHP51688 502 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 PPP3CAQ08209 521 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 STK38Q15208 465 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 SGSM1Q2NKQ1 1148 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 KIAA0907Q7Z7F0 614 aaPredicted RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 WFDC5Q8TCV5 224 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 RHBDD1Q8TEB9 315 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 DOCK9Q9BZ29 2069 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 EBF2Q9HAK2 575 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 CGNQ9P2M7 1197 aaKnown RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 NAGPAQ9UK23 515 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 PTPRQQ9UMZ3 2332 aa12.75□□□□□ -0.37
PHC3-201ENST00000465896 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.75□□□□□ -0.37
PHC3-201ENST00000465896 ARID1BQ8NFD5 2236 aaPredicted RBP12.74□□□□□ -0.37
PHC3-201ENST00000465896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
PHC3-201ENST00000465896 PVALEFA0A1B0GWK0 134 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 GOLGA8CPA6NN73 597 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 H0Y8X5 98 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 CBX4O00257 560 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 TULP2O00295 520 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 FLRT2O43155 660 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 CER1O95813 267 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 HLA-FP30511 346 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 AFMP43652 599 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 ZNF132P52740 706 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 AP3M2P53677 418 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 EFEMP1Q12805 493 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 STARD3Q14849 445 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 SHBQ15464 509 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 ANKS1BQ7Z6G8 1248 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 DENND1CQ8IV53 801 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 CPXM2Q8N436 756 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 IQUBQ8NA54 791 aa12.74□□□□□ -0.37
PHC3-201ENST00000465896 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms