RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZACNQ401N2 412 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 ACSM6Q6P461 480 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 RANBP10Q6VN20 620 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 ZNF66Q6ZN08 573 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 EID2BQ96D98 161 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 CRB3Q9BUF7 120 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 KCNK9Q9NPC2 374 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 FBXO28Q9NVF7 368 aa6.85□□□□□ -1.31
PTCD3-205ENST00000464541 SYT5O00445 386 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 TAF5LO75529 589 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 SRSF4Q08170 494 aaKnown RBP6.84□□□□□ -1.31
PTCD3-205ENST00000464541 PUM3Q15397 648 aaKnown RBP6.84□□□□□ -1.31
PTCD3-205ENST00000464541 P3H1Q32P28 736 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 MSANTD2Q6P1R3 559 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-205ENST00000464541 PRR11Q96HE9 360 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-205ENST00000464541 C5orf34Q96MH7 638 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 RPS6KC1Q96S38 1066 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 FSCN3Q9NQT6 498 aa6.84□□□□□ -1.31
PTCD3-205ENST00000464541 SIRT4Q9Y6E7 314 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-205ENST00000464541 CCDC187A0A096LP49 1063 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-205ENST00000464541 F5H423 210 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-205ENST00000464541 SLC3A2P08195 630 aaKnown RBP6.83□□□□□ -1.32
PTCD3-205ENST00000464541 CNGA3Q16281 694 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 PFKFB3Q16875 520 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-205ENST00000464541 PFKFB4Q16877 469 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 CC2D1BQ5T0F9 858 aaKnown RBP6.83□□□□□ -1.32
PTCD3-205ENST00000464541 KRT27Q7Z3Y8 459 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 NEK8Q86SG6 692 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 C16orf71Q8IYS4 520 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-205ENST00000464541 P2RY11Q96G91 374 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 FAR2Q96K12 515 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 FAM118BQ9BPY3 351 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 OBP2BQ9NPH6 170 aa6.83□□□□□ -1.32
PTCD3-205ENST00000464541 WDR17Q8IZU2 1322 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-205ENST00000464541 LGALS16A8MUM7 142 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 ASNA1O43681 348 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 CYP2D6P10635 497 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 EPHB2P29323 1055 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 PDIA3P30101 505 aaKnown RBP6.82□□□□□ -1.32
PTCD3-205ENST00000464541 CHAF1AQ13111 956 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-205ENST00000464541 SLC14A1Q13336 389 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 MEX3CQ5U5Q3 659 aaKnown RBP6.82□□□□□ -1.32
PTCD3-205ENST00000464541 ANO7Q6IWH7 933 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 TRABD2AQ86V40 505 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-205ENST00000464541 POF1BQ8WVV4 589 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 AKAP1Q92667 903 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTCD3-205ENST00000464541 VOPP1Q96AW1 172 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 EFHD1Q9BUP0 239 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 KATNAL1Q9BW62 490 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 NUAK2Q9H093 628 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 CDCP1Q9H5V8 836 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 PCDHB2Q9Y5E7 798 aa6.82□□□□□ -1.32
PTCD3-205ENST00000464541 AQP12BA6NM10 295 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 DSCR3O14972 297 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 USP12O75317 370 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 ITGA2BP08514 1039 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 SERPINF1P36955 418 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 BLMHQ13867 455 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 ZNF268Q14587 947 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-205ENST00000464541 GRM4Q14833 912 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 EZH2Q15910 746 aaKnown RBP6.81□□□□□ -1.32
PTCD3-205ENST00000464541 TRIM60Q495X7 471 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 GLE1Q53GS7 698 aaKnown RBP6.81□□□□□ -1.32
PTCD3-205ENST00000464541 CEP78Q5JTW2 689 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 RINT1Q6NUQ1 792 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 MIS18BP1Q6P0N0 1132 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 RINLQ6ZS11 566 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 RMDN3Q96TC7 470 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 EPS8L2Q9H6S3 715 aa6.81□□□□□ -1.32
PTCD3-205ENST00000464541 SCAF8Q9UPN6 1271 aaKnown RBP6.81□□□□□ -1.32
PTCD3-205ENST00000464541 CYP2D7A0A087X1C5 515 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 CSTBP04080 98 aaKnown RBP6.8□□□□□ -1.32
PTCD3-205ENST00000464541 TACR3P29371 465 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 HOXD12P35452 270 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 CDK7P50613 346 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 HSF1Q00613 529 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 FOXO1Q12778 655 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 ELF2Q15723 593 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 FAM110CQ1W6H9 321 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 OSR1Q8TAX0 266 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-205ENST00000464541 SLC22A17Q8WUG5 538 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 STYXQ8WUJ0 223 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 SENP7Q9BQF6 1050 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 NRIP3Q9NQ35 241 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 HERC5Q9UII4 1024 aaKnown RBP6.8□□□□□ -1.32
PTCD3-205ENST00000464541 VPS4AQ9UN37 437 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 PCDHB7Q9Y5E2 793 aa6.8□□□□□ -1.32
PTCD3-205ENST00000464541 SPATA31A5Q5VU36 1347 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 SPATA31A7Q8IWB4 1347 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 ALADP13716 330 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 KELP23276 732 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 NDUFS1P28331 727 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 SLC8A1P32418 973 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-205ENST00000464541 GALNT1Q10472 559 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-205ENST00000464541 SRSF7Q16629 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms