RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 VWA3BQ502W6 1294 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 LY6G5CQ5SRR4 150 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
SSR3-202ENST00000463503 SARM1Q6SZW1 724 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 PCSK4Q6UW60 755 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 DBX2Q6ZNG2 339 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
SSR3-202ENST00000463503 TERB1Q8NA31 727 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 SETD7Q8WTS6 366 aaKnown RBP11.76□□□□□ -0.53
SSR3-202ENST00000463503 DNASE2BQ8WZ79 361 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 TAF4BQ92750 862 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 SPATA17Q96L03 361 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 ZNF560Q96MR9 790 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 ACOX2Q99424 681 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 MTMR12Q9C0I1 747 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 SLC6A17Q9H1V8 727 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 SMPD4Q9NXE4 827 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 SIX4Q9UIU6 781 aa11.76□□□□□ -0.53
SSR3-202ENST00000463503 FLNCQ14315 2725 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 A0A1B0GTH6 734 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 ZNF840PA6NDX5 716 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 LGALS16A8MUM7 142 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 SLC9A3R1O14745 358 aaPredicted RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 TRIM24O15164 1050 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 HOXC11O43248 304 aaPredicted RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 CILPO75339 1184 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 TULP3O75386 442 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 VNN1O95497 513 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 FAM163BP0C2L3 166 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 TRIM49P0CI25 452 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 TRIM49CP0CI26 452 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 ATP1A3P13637 1013 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 CDK11BP21127 795 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 NTSR1P30989 418 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 WASP42768 502 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 RBP5P82980 135 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 CETN1Q12798 172 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 PTPRNQ16849 979 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 DCAF17Q5H9S7 520 aaPredicted RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 TCERG1LQ5VWI1 586 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 EGFLAMQ63HQ2 1017 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 FAM171BQ6P995 826 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 SCN4BQ8IWT1 228 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 RGL4Q8IZJ4 473 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 ZCCHC9Q8N567 271 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 LSM14AQ8ND56 463 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 IPO4Q8TEX9 1081 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 FAM84AQ96KN4 292 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
SSR3-202ENST00000463503 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 GABRG3Q99928 467 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 CFAP97Q9P2B7 532 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 BTBD3Q9Y2F9 522 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 STARD13Q9Y3M8 1113 aa11.75□□□□□ -0.53
SSR3-202ENST00000463503 TEX15Q9BXT5 2789 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 A0A1B0GTW7 788 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 GABRDO14764 452 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 ITGB3P05106 788 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 GNSP15586 552 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 POLR2BP30876 1174 aaKnown RBP11.74□□□□□ -0.53
SSR3-202ENST00000463503 GCLMP48507 274 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 FANCCQ00597 558 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 MYL7Q01449 175 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 C10orf76Q5T2E6 689 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 DENND5BQ6ZUT9 1274 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 ZNF605Q86T29 641 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 SPATA2LQ8IUW3 424 aaPredicted RBP11.74□□□□□ -0.53
SSR3-202ENST00000463503 TMEM86AQ8N2M4 240 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 GALNT15Q8N3T1 639 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
SSR3-202ENST00000463503 LMO3Q8TAP4 145 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 FOXJ1Q92949 421 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 MYLPFQ96A32 169 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 ERLEC1Q96DZ1 483 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 MRGPRX1Q96LB2 322 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 XYLT2Q9H1B5 865 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 PRDM16Q9HAZ2 1276 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
SSR3-202ENST00000463503 TM7SF3Q9NS93 570 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 GDAP2Q9NXN4 497 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 TRPM5Q9NZQ8 1165 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 DAAM1Q9Y4D1 1078 aa11.74□□□□□ -0.53
SSR3-202ENST00000463503 ARID1BQ8NFD5 2236 aaPredicted RBP11.74□□□□□ -0.53
SSR3-202ENST00000463503 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
SSR3-202ENST00000463503 TBC1D3BA6NDS4 549 aa11.73□□□□□ -0.53
SSR3-202ENST00000463503 FLRT2O43155 660 aa11.73□□□□□ -0.53
SSR3-202ENST00000463503 TLX3O43711 291 aaPredicted RBP11.73□□□□□ -0.53
SSR3-202ENST00000463503 ATP2C2O75185 946 aa11.73□□□□□ -0.53
SSR3-202ENST00000463503 CER1O95813 267 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms