RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 VPS16Q9H269 839 aa7.12□□□□□ -1.27
CHL1-209ENST00000461289 SAP30LQ9HAJ7 183 aa7.12□□□□□ -1.27
CHL1-209ENST00000461289 SH3BP4Q9P0V3 963 aa7.12□□□□□ -1.27
CHL1-209ENST00000461289 GTF2A1LQ9UNN4 478 aa7.12□□□□□ -1.27
CHL1-209ENST00000461289 ENTPD2Q9Y5L3 495 aa7.12□□□□□ -1.27
CHL1-209ENST00000461289 H0Y3Z8 333 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 GCATO75600 419 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 KRT4P19013 534 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 GPD1P21695 349 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 ADD2P35612 726 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 PAPOLAP51003 745 aaKnown RBP7.11□□□□□ -1.27
CHL1-209ENST00000461289 JAK3P52333 1124 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 PRKAA2P54646 552 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 INHBCP55103 352 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 CYP4F2P78329 520 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 DNASE1L3Q13609 305 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 CUL4BQ13620 913 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 TMEM63BQ5T3F8 832 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 AMER2Q8N7J2 671 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 C12orf76Q8N812 135 aaPredicted RBP7.11□□□□□ -1.27
CHL1-209ENST00000461289 THAP4Q8WY91 577 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 MCRS1Q96EZ8 462 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 PRR11Q96HE9 360 aaPredicted RBP7.11□□□□□ -1.27
CHL1-209ENST00000461289 UROC1Q96N76 676 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 BAG5Q9UL15 447 aa7.11□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3DA0A087WVF3 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3IA0A087WXS9 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3EA0A087X179 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3KA0A087X1G2 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 CCDC187A0A096LP49 1063 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3BA6NDS4 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 FAM90A18PA6NE21 464 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3FA6NER0 549 aaPredicted RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 FAM90A16PA6NEW6 464 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 FAM90A9PA6NNJ1 464 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 FAM90A5PA8MXJ8 464 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3LB9A6J9 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 MGST3O14880 152 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 FAM90A15PP0C7V4 464 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 FAM90A14PP0C7W9 464 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3HP0C7X1 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 MATN1P21941 496 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 GALNSP34059 522 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 CACNA2D1P54289 1103 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 SOX10P56693 466 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 RAE1P78406 368 aaKnown RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 TRIM60Q495X7 471 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 RNASE12Q5GAN4 147 aaKnown RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3GQ6DHY5 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3CQ6IPX1 549 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TMEM65Q6PI78 240 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TRIM72Q6ZMU5 477 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 AMIGO2Q86SJ2 522 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TBC1D3Q8IZP1 549 aaPredicted RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 OR52L2PQ8NGH6 319 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 MAFAQ8NHW3 353 aaPredicted RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 CSGALNACT1Q8TDX6 532 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 MACROD1Q9BQ69 325 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 PAAF1Q9BRP4 392 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 PYM1Q9BRP8 204 aaKnown RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 THAP7Q9BT49 309 aaPredicted RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 DDX23Q9BUQ8 820 aaKnown RBP7.1□□□□□ -1.27
CHL1-209ENST00000461289 ADGRE3Q9BY15 652 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 VPS45Q9NRW7 570 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 ASB6Q9NWX5 421 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 RRN3Q9NYV6 651 aa7.1□□□□□ -1.27
CHL1-209ENST00000461289 TTC34A8MYJ7 566 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 E7EVH7 732 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 EIF3FO00303 357 aaPredicted RBP7.09□□□□□ -1.27
CHL1-209ENST00000461289 PRAMEF2O60811 474 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 C1RP00736 705 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 RXRAP19793 462 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 GPC5P78333 572 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 KLF10Q13118 480 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 AAK1Q2M2I8 961 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 TBRG1Q3YBR2 411 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 LDLRAD3Q86YD5 345 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 SUGP1Q8IWZ8 645 aaKnown RBP7.09□□□□□ -1.27
CHL1-209ENST00000461289 SPPL3Q8TCT6 385 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 SNX18Q96RF0 628 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 MECRQ9BV79 373 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 RXFP3Q9NSD7 469 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 RAB21Q9UL25 225 aa7.09□□□□□ -1.27
CHL1-209ENST00000461289 TRPC5Q9UL62 973 aaPredicted RBP7.09□□□□□ -1.27
CHL1-209ENST00000461289 KAT6AQ92794 2004 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 GXYLT2A0PJZ3 443 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 JTBO76095 146 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 GRK5P34947 590 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 RBM5P52756 815 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHL1-209ENST00000461289 ACTR2P61160 394 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 HOXA4Q00056 320 aaPredicted RBP7.08□□□□□ -1.28
CHL1-209ENST00000461289 CFHR3Q02985 330 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 MFSD13AQ14CX5 517 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 CNGA3Q16281 694 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 FAM187BQ17R55 369 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 CC2D1BQ5T0F9 858 aaKnown RBP7.08□□□□□ -1.28
CHL1-209ENST00000461289 TTC22Q5TAA0 569 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 WDR93Q6P2C0 686 aa7.08□□□□□ -1.28
CHL1-209ENST00000461289 ACSM6Q6P461 480 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms