RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 PTPN23Q9H3S7 1636 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 BTBD19C9JJ37 291 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 TMEM232C9JQI7 657 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 MBPP02686 304 aaPredicted RBP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 TUBB4AP04350 444 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 IDEP14735 1019 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SFPQP23246 707 aaKnown RBP eCLIP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 CERS1P27544 350 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 GALNSP34059 522 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 CFHR3Q02985 330 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SLC14A1Q13336 389 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 ZNF268Q14587 947 aaPredicted RBP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SRSF7Q16629 238 aaKnown RBP eCLIP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 TMEM196Q5HYL7 178 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 TMTC4Q5T4D3 741 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SLC18B1Q6NT16 456 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 FBXO38Q6PIJ6 1188 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SLC2A7Q6PXP3 512 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 GALNT16Q8N428 558 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 C12orf76Q8N812 135 aaPredicted RBP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 NGDNQ8NEJ9 315 aaKnown RBP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 ADAMTS18Q8TE60 1221 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 IPO4Q8TEX9 1081 aaKnown RBP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 ABHD5Q8WTS1 349 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 BRI3BPQ8WY22 251 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 ZNF566Q969W8 418 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 MYD88Q99836 296 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SEMA4CQ9C0C4 833 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 TMOD4Q9NZQ9 345 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 SETD1BQ9UPS6 1966 aaKnown RBP4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 KIAA1107Q9UPP5 1409 aa4.29□□□□□ -1.72
SSX2IP-204ENST00000459708 CEP170Q5SW79 1584 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 NEURL4Q96JN8 1562 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 MAST1Q9Y2H9 1570 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 ABCC2Q92887 1545 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 KDM5DQ9BY66 1539 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 KDM5BQ9UGL1 1544 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 SMIM35A0A1B0GVV1 85 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 WDR91A4D1P6 747 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 OR2W5A6NFC9 320 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 H3BNC9 293 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 FYB1O15117 783 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 PLIN1O60240 522 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 TMIGD3P0DMS9 266 aaPredicted RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 CCDC15Q0P6D6 951 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 DNASE1L3Q13609 305 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 ATP1A4Q13733 1029 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 KLF9Q13886 244 aaPredicted RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 MTX3Q5HYI7 312 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 CNGA4Q8IV77 575 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 DEPTORQ8TB45 409 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 GJA10Q969M2 543 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 GRAMD1AQ96CP6 724 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 HIC2Q96JB3 615 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 TNIP3Q96KP6 325 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 CCDC17Q96LX7 622 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 EIF2AQ9BY44 585 aaKnown RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 FSCN3Q9NQT6 498 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 ZNF70Q9UC06 446 aaPredicted RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 FZD4Q9ULV1 537 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 SCAF8Q9UPN6 1271 aaKnown RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 COL3A1P02461 1466 aaPredicted RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 NUP153P49790 1475 aaKnown RBP4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 TEX14Q8IWB6 1497 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 ADGBQ8N7X0 1667 aa4.28□□□□□ -1.72
SSX2IP-204ENST00000459708 DHX57Q6P158 1386 aaKnown RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 WDR17Q8IZU2 1322 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 CLASP1Q7Z460 1538 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 FAM135AQ9P2D6 1515 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 CLIC1O00299 241 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 PCDH17O14917 1159 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 ZSCAN9O15535 394 aaPredicted RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 DHHO43323 396 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 RNF8O76064 485 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 VIPP01282 170 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 IFIT2P09913 472 aaKnown RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 KELP23276 732 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 WDR5P61964 334 aaKnown RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 YPEL5P62699 121 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 NSUN2Q08J23 767 aaKnown RBP eCLIP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 BFSP2Q13515 415 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 KCNJ12Q14500 433 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 KPNB1Q14974 876 aaKnown RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 RAB30Q15771 203 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 MAPKAPK3Q16644 382 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 CC2D1BQ5T0F9 858 aaKnown RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 SYCP2LQ5T4T6 812 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 MIS18BP1Q6P0N0 1132 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 ZNF813Q6ZN06 617 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 PIK3AP1Q6ZUJ8 805 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 KRT73Q86Y46 540 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 FAM186BQ8IYM0 893 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 FAM71DQ8N9W8 422 aa4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
SSX2IP-204ENST00000459708 ZNF398Q8TD17 642 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms