RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 OTUD4Q01804 1114 aaKnown RBP16.76■□□□□ 0.27
TMEM220-202ENST00000455996 IFRD2Q12894 506 aaPredicted RBP16.76■□□□□ 0.27
TMEM220-202ENST00000455996 TAF10Q12962 218 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 NNTQ13423 1086 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 PPP2R5DQ14738 602 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 TRADDQ15628 312 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 SNX30Q5VWJ9 437 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 EMBQ6PCB8 327 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 KLHL23Q8NBE8 558 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 STKLD1Q8NE28 680 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 GPR152Q8TDT2 470 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 RNF139Q8WU17 664 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 CASP10Q92851 521 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 HINFPQ9BQA5 517 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 MAGEB5Q9BZ81 275 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 FAM129AQ9BZQ8 928 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 PLEKHA4Q9H4M7 779 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 TLR8Q9NR97 1041 aaKnown RBP16.76■□□□□ 0.27
TMEM220-202ENST00000455996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.76■□□□□ 0.27
TMEM220-202ENST00000455996 RWDD3Q9Y3V2 267 aa16.76■□□□□ 0.27
TMEM220-202ENST00000455996 SYNJ2BP-COX16A0A087WUM0 186 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 H3BRJ5 948 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 APOL1O14791 398 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 TEX28O15482 410 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 DAPK3O43293 454 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 ATP8B1O43520 1251 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 PECAM1P16284 738 aaPredicted RBP16.75■□□□□ 0.27
TMEM220-202ENST00000455996 ARL4AP40617 200 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 DYNLT1P63172 113 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 MTMR3Q13615 1198 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 NOMO1Q15155 1222 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 PPP6R3Q5H9R7 873 aaPredicted RBP16.75■□□□□ 0.27
TMEM220-202ENST00000455996 PYROXD2Q8N2H3 581 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 ALLCQ8N6M5 410 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 CAVIN3Q969G5 261 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 MYRFLQ96LU7 910 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 SERPINB11Q96P15 392 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 HAPLN3Q96S86 360 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 UBE2OQ9C0C9 1292 aaKnown RBP16.75■□□□□ 0.27
TMEM220-202ENST00000455996 OSBPL2Q9H1P3 480 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 WDCPQ9H6R7 721 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 OLA1Q9NTK5 396 aaKnown RBP16.75■□□□□ 0.27
TMEM220-202ENST00000455996 COX16Q9P0S2 106 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 YIPF1Q9Y548 306 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 IRAK3Q9Y616 596 aa16.75■□□□□ 0.27
TMEM220-202ENST00000455996 LCHNA4D1U4 455 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 HMGA1P17096 107 aaKnown RBP16.74■□□□□ 0.27
TMEM220-202ENST00000455996 IVDP26440 423 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 KLRC2P26717 231 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 NR2C2P49116 596 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 DPYSQ14117 519 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 PDZD8Q8NEN9 1154 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.74■□□□□ 0.27
TMEM220-202ENST00000455996 GIPC2Q8TF65 315 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 AUTS2Q8WXX7 1259 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 IFT81Q8WYA0 676 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 TRMT2BQ96GJ1 504 aaKnown RBP16.74■□□□□ 0.27
TMEM220-202ENST00000455996 SLC39A13Q96H72 371 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 FAM118BQ9BPY3 351 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 TMPRSS4Q9NRS4 437 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 ZDHHC18Q9NUE0 388 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 GRHL1Q9NZI5 618 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 SAE1Q9UBE0 346 aaPredicted RBP16.74■□□□□ 0.27
TMEM220-202ENST00000455996 NFU1Q9UMS0 254 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 GREB1Q4ZG55 1949 aa16.74■□□□□ 0.27
TMEM220-202ENST00000455996 KCNU1A8MYU2 1149 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 C5orf67F2Z3F1 127 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 SEC31AO94979 1220 aaKnown RBP16.73■□□□□ 0.27
TMEM220-202ENST00000455996 CSH1P0DML2 217 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 CSH2P0DML3 217 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 RARGP13631 454 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 GOT1P17174 413 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 CCR1P32246 355 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 RPL21P46778 160 aaKnown RBP16.73■□□□□ 0.27
TMEM220-202ENST00000455996 PPP1R7Q15435 360 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 LILRA6Q6PI73 481 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 DDX42Q86XP3 938 aaKnown RBP eCLIP16.73■□□□□ 0.27
TMEM220-202ENST00000455996 GSPT2Q8IYD1 628 aaKnown RBP16.73■□□□□ 0.27
TMEM220-202ENST00000455996 CCHCR1Q8TD31 782 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 P3H4Q92791 437 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 HAUS1Q96CS2 278 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 CDK5RAP1Q96SZ6 601 aaKnown RBP16.73■□□□□ 0.27
TMEM220-202ENST00000455996 CYP4F11Q9HBI6 524 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 ARHGEF4Q9NR80 690 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 ZNF148Q9UQR1 794 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 TLR6Q9Y2C9 796 aa16.73■□□□□ 0.27
TMEM220-202ENST00000455996 LINC01553A4QN01 128 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 MCF2LO15068 1137 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 CNPP09543 421 aaKnown RBP16.72■□□□□ 0.27
TMEM220-202ENST00000455996 DNAJB2P25686 324 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 HTR7P34969 479 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 ALDH1A3P47895 512 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 EIF3EP60228 445 aaKnown RBP16.72■□□□□ 0.27
TMEM220-202ENST00000455996 RBM10P98175 930 aaKnown RBP16.72■□□□□ 0.27
TMEM220-202ENST00000455996 NRG1Q02297 640 aaPredicted RBP16.72■□□□□ 0.27
TMEM220-202ENST00000455996 UBE3AQ05086 875 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 XRCC4Q13426 336 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 ZDHHC24Q6UX98 284 aa16.72■□□□□ 0.27
TMEM220-202ENST00000455996 RFX8Q6ZV50 586 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms