RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 GPR42O15529 346 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PRC1O43663 620 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 DLX3O60479 287 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PSMD10O75832 226 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 EPN2O95208 641 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 RHOP08100 348 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 TCF3P15923 654 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 AXLP30530 894 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 HOXC13P31276 330 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 MCM5P33992 734 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 MLH1P40692 756 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 FNTBP49356 437 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 JAK3P52333 1124 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PPP2CBP62714 309 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PPP2CAP67775 309 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 NUCB1Q02818 461 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 NFATC3Q12968 1075 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PCBP1Q15365 356 aaKnown RBP eCLIP4.08□□□□□ -1.76
RBM39-220ENST00000455343 LAMA4Q16363 1823 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 SLC5A9Q2M3M2 681 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 MTERF2Q49AM1 385 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 AASDHQ4L235 1098 aaPredicted RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 PABPC1LQ4VXU2 614 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 PRR16Q569H4 304 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PPM1LQ5SGD2 360 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 LIN9Q5TKA1 542 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 JAKMIP3Q5VZ66 844 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 TRMT10BQ6PF06 316 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 CASC1Q6TDU7 716 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PRSS55Q6UWB4 352 aaPredicted RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 USP53Q70EK8 1073 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 ANO5Q75V66 913 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 WDR5BQ86VZ2 330 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CHD1LQ86WJ1 897 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CIR1Q86X95 450 aaPredicted RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 TRIM48Q8IWZ4 208 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 KBTBD2Q8IY47 623 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CELF2-AS1Q8N7Q2 184 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 RDM1Q8NG50 284 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 EXOC6Q8TAG9 804 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 HNRNPLLQ8WVV9 542 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 SLC5A5Q92911 643 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 KISS1RQ969F8 398 aaPredicted RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 MCRS1Q96EZ8 462 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 MSANTD3Q96H12 275 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 ZC3H10Q96K80 434 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 JPH2Q9BR39 696 aaPredicted RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 SH2D3AQ9BRG2 576 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PAAF1Q9BRP4 392 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 TTPALQ9BTX7 342 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 TRMT61BQ9BVS5 477 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 JAM3Q9BX67 310 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 EIF2AQ9BY44 585 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 ZMYND12Q9H0C1 365 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CSRNP2Q9H175 543 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 ARRDC1-AS1Q9H2J1 176 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 DHX33Q9H6R0 707 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 DOCK5Q9H7D0 1870 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 BRD9Q9H8M2 597 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 CD248Q9HCU0 757 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 DLL4Q9NR61 685 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 HCFC1R1Q9NWW0 138 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 C2orf42Q9NWW7 574 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 ZMYM2Q9UBW7 1377 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 NDRG2Q9UN36 371 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 GIT1Q9Y2X7 761 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 MRPS23Q9Y3D9 190 aaKnown RBP4.08□□□□□ -1.76
RBM39-220ENST00000455343 TSC22D4Q9Y3Q8 395 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 HES2Q9Y543 173 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PCDHGA5Q9Y5G8 931 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 COL4A3BPQ9Y5P4 624 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 PIAS3Q9Y6X2 628 aa4.08□□□□□ -1.76
RBM39-220ENST00000455343 F5P12259 2224 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 BAZ2BQ9UIF8 2168 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 DOCK8Q8NF50 2099 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 AKAP13Q12802 2813 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 GCN1Q92616 2671 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 SF3B1O75533 1304 aaKnown RBP eCLIP4.07□□□□□ -1.763e-7■■□□□ 14.3
RBM39-220ENST00000455343 A0A1B0GUA9 196 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 ARHGEF37A1IGU5 675 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 FAM221BA6H8Z2 402 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 NPEPPSL1A6NEC2 478 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 ASAP2O43150 1006 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 TSPAN1O60635 241 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 MOSPD3O75425 235 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 TADA2AO75478 443 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 AKAP3O75969 853 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 ABLIM3O94929 683 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 TOP3BO95985 862 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 CEACAM1P13688 526 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 GSPT1P15170 499 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 CEBPBP17676 345 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 PSMC3P17980 439 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 CSRP1P21291 193 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 CCNE1P24864 410 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 GRK2P25098 689 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 CHMLP26374 656 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 GRK3P35626 688 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 NOVA1P51513 510 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms