RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 TCRBV21S2A2A0A5A6 115 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 MED19A0JLT2 244 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 DCDC2BA2VCK2 349 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 PRR5-ARHGAP8B1AHC4 643 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 RNF225M0QZC1 329 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 XPO1O14980 1071 aaKnown RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 GREM1O60565 184 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ALDH1A2O94788 518 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 EPN2O95208 641 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ZBED1O96006 694 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 AFPP02771 609 aaKnown RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 KLKB1P03952 638 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 BCKDHBP21953 392 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 CORO1AP31146 461 aaKnown RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 TNFRSF4P43489 277 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 KIR2DL1P43626 348 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 ATXN1P54253 815 aaKnown RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 ARHGAP8P85298 464 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 CREB5Q02930 508 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 BST2Q10589 180 aaKnown RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 CETN1Q12798 172 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 KCNH2Q12809 1159 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 NUMA1Q14980 2115 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ELF2Q15723 593 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 CSRP2Q16527 193 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 PLK5Q496M5 336 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 USP39Q53GS9 565 aaKnown RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 EOGTQ5NDL2 527 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 EGFLAMQ63HQ2 1017 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 TCEAL6Q6IPX3 200 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ARMCX6Q7L4S7 300 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ERMP1Q7Z2K6 904 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ELOA2Q8IYF1 753 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 CYP4X1Q8N118 509 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 SIX6OS1Q8N1H7 587 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 ARHGAP18Q8N392 663 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 UBR7Q8N806 425 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 TERB1Q8NA31 727 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 RBBP8NLQ8NC74 664 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 RNF139Q8WU17 664 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 RLN3Q8WXF3 142 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 TFAP2BQ92481 460 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 TCEAL3Q969E4 200 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 FAXDC2Q96IV6 333 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 DUSP15Q9H1R2 295 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 POLMQ9NP87 494 aaPredicted RBP9.09□□□□□ -0.95
RFX3-209ENST00000451859 DLL3Q9NYJ7 618 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 CLIC5Q9NZA1 410 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
RFX3-209ENST00000451859 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.09□□□□□ -0.95
RFX3-209ENST00000451859 ASCC3Q8N3C0 2202 aaKnown RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 YJEFN3A6XGL0 299 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 E7ENQ6 273 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 O00370 1275 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 CACNG3O60359 315 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 TSPAN3O60637 253 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 LRP3O75074 770 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 ADAM23O75077 832 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 SETSIPP0DME0 302 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 VDRP11473 427 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 KRT5P13647 590 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 HOXB2P14652 356 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 SNRPBP14678 240 aaKnown RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 MPLP40238 635 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 DHPSP49366 369 aaPredicted RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 DGKGP49619 791 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 UBE2HP62256 183 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 COG7P83436 770 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 PREPLQ4J6C6 727 aaPredicted RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 RAB41Q5JT25 222 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 KLHDC10Q6PID8 442 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 FMNL3Q8IVF7 1028 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 TRIM59Q8IWR1 403 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 CHPFQ8IZ52 775 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 FRMD1Q8N878 549 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 CLEC4CQ8WTT0 213 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 CNOT6LQ96LI5 555 aaKnown RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 CDK5RAP1Q96SZ6 601 aaKnown RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 ACOX2Q99424 681 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 CRACR2AQ9BSW2 395 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 INTS2Q9H0H0 1204 aaKnown RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 CHMP5Q9NZZ3 219 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 WDR35Q9P2L0 1181 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 EBF1Q9UH73 591 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 FCF1Q9Y324 198 aaKnown RBP9.08□□□□□ -0.96
RFX3-209ENST00000451859 RAD54BQ9Y620 910 aa9.08□□□□□ -0.96
RFX3-209ENST00000451859 MUC22E2RYF6 1773 aaPredicted RBP9.07□□□□□ -0.96
RFX3-209ENST00000451859 TMEM131Q92545 1883 aa9.07□□□□□ -0.96
RFX3-209ENST00000451859 PRRT4C9JH25 899 aa9.07□□□□□ -0.96
RFX3-209ENST00000451859 MSI1O43347 362 aaKnown RBP9.07□□□□□ -0.96
RFX3-209ENST00000451859 RHOBTB1O94844 696 aa9.07□□□□□ -0.96
RFX3-209ENST00000451859 GNA14O95837 355 aa9.07□□□□□ -0.96
RFX3-209ENST00000451859 PAEPP09466 180 aa9.07□□□□□ -0.96
RFX3-209ENST00000451859 USP8P40818 1118 aa9.07□□□□□ -0.96
RFX3-209ENST00000451859 DAOAP59103 153 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms