RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 NUGGCQ68CJ6 796 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 PMS2CLQ68D20 193 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 ANO7Q6IWH7 933 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 PMF1Q6P1K2 205 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 SLC36A4Q6YBV0 504 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 RRAGAQ7L523 313 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 FMNL3Q8IVF7 1028 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 C12orf50Q8NA57 414 aaPredicted RBP16.75■□□□□ 0.27
SGCE-208ENST00000450385 MDGA1Q8NFP4 955 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 GABRG3Q99928 467 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 ARRDC1-AS1Q9H2J1 176 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 UBE2TQ9NPD8 197 aaPredicted RBP16.75■□□□□ 0.27
SGCE-208ENST00000450385 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
SGCE-208ENST00000450385 BCLAF3A2AJT9 711 aaKnown RBP16.74■□□□□ 0.27
SGCE-208ENST00000450385 M0QYV0 167 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 HOXD12P35452 270 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 GPD2P43304 727 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 SNX16P57768 344 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 EXOC3L4Q17RC7 722 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 TRIM65Q6PJ69 517 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 DENND1CQ8IV53 801 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 KREMEN1Q96MU8 473 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 MED15Q96RN5 788 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 DDX50Q9BQ39 737 aaKnown RBP16.74■□□□□ 0.27
SGCE-208ENST00000450385 POLR3BQ9NW08 1133 aaPredicted RBP16.74■□□□□ 0.27
SGCE-208ENST00000450385 APEX2Q9UBZ4 518 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 CEP192Q8TEP8 1941 aa16.74■□□□□ 0.27
SGCE-208ENST00000450385 PI4KAP42356 2102 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 LTFP02788 710 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 LCP1P13796 627 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 HOXB2P14652 356 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 GBP1P32455 592 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 MPLP40238 635 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 MTA1Q13330 715 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 LPCAT2Q7L5N7 544 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 TMEM110Q86TL2 294 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 METTL3Q86U44 580 aaKnown RBP16.73■□□□□ 0.27
SGCE-208ENST00000450385 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 CHPFQ8IZ52 775 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 ZNF606Q8WXB4 792 aa16.73■□□□□ 0.27
SGCE-208ENST00000450385 BCCIPQ9P287 314 aaKnown RBP eCLIP16.73■□□□□ 0.27
SGCE-208ENST00000450385 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.73■□□□□ 0.27
SGCE-208ENST00000450385 MAP3K13O43283 966 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 CAVIN2O95810 425 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 IGLV3-27P01718 113 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 HMBSP08397 361 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 KRT5P13647 590 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
SGCE-208ENST00000450385 HOXC13P31276 330 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 SLC11A2P49281 568 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 ENPP2Q13822 863 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 ANKS1BQ7Z6G8 1248 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 RABEPKQ7Z6M1 372 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 IRF2BP1Q8IU81 584 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 SFTPA1Q8IWL2 248 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 DDI1Q8WTU0 396 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 KAT5Q92993 513 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 TMA16Q96EY4 203 aaKnown RBP16.72■□□□□ 0.27
SGCE-208ENST00000450385 PIWIL1Q96J94 861 aaKnown RBP16.72■□□□□ 0.27
SGCE-208ENST00000450385 ZSWIM1Q9BR11 485 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 SLC4A5Q9BY07 1137 aa16.72■□□□□ 0.27
SGCE-208ENST00000450385 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.71■□□□□ 0.27
SGCE-208ENST00000450385 A0A1W2PQF6 199 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 TCRBV21S2A2A0A5A6 115 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 PRRT4C9JH25 899 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 AP5Z1O43299 807 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 GLI1P08151 1106 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 GNA15P30679 374 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 MTIF2P46199 727 aaKnown RBP16.71■□□□□ 0.27
SGCE-208ENST00000450385 BPIFB4P59827 614 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 STARD3Q14849 445 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 MAN2A1Q16706 1144 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 MAP7D1Q3KQU3 841 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
SGCE-208ENST00000450385 EGFLAMQ63HQ2 1017 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 PGBD3Q8N328 593 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 WFIKKN2Q8TEU8 576 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
SGCE-208ENST00000450385 HMGB4Q8WW32 186 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 SHC3Q92529 594 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 SERPINB11Q96P15 392 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 TPSD1Q9BZJ3 242 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 NUP62CLQ9H1M0 184 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 LHX5Q9H2C1 402 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 ELOVL2Q9NXB9 296 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 THAP10Q9P2Z0 257 aaPredicted RBP16.71■□□□□ 0.27
SGCE-208ENST00000450385 HCN2Q9UL51 889 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 PCDHGC3Q9UN70 934 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 TLR6Q9Y2C9 796 aa16.71■□□□□ 0.27
SGCE-208ENST00000450385 GON4LQ3T8J9 2241 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 DCLK1O15075 740 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 GABBR2O75899 941 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 C7P10643 843 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 PON1P27169 355 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 CREB5Q02930 508 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 PTK2Q05397 1052 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 RNF43Q68DV7 783 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 IL31Q6EBC2 164 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 TOGARAM2Q6ZUX3 1019 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms