RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ANKRD42Q8N9B4 389 aa16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 DBF4BQ8NFT6 615 aa16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 SUSD3Q96L08 255 aa16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 ACBD6Q9BR61 282 aa16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 PPCSQ9HAB8 311 aa16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 ZMYND8Q9ULU4 1186 aaPredicted RBP16.69■□□□□ 0.26
AP000253.1-201ENST00000449339 YJEFN3A6XGL0 299 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 HHLA1C9JL84 531 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 E7ENQ6 273 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 TRIM66O15016 1216 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 KIAA0754O94854 1291 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 FYNP06241 537 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 GATMP50440 423 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 NR1H3Q13133 447 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 KCNJ11Q14654 390 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 FAM171BQ6P995 826 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 C3orf62Q6ZUJ4 267 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 SMARCD1Q96GM5 515 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 CSPG4P5Q96PW8 444 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 KCTD15Q96SI1 283 aaPredicted RBP16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 RAB6BQ9NRW1 208 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 PRG3Q9Y2Y8 225 aaPredicted RBP16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 SCN5AQ14524 2016 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 DNM1LO00429 736 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 CHADO15335 359 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 PQBP1O60828 265 aaKnown RBP16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 ZFXP17010 805 aaPredicted RBP16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 OR1G1P47890 313 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 DAOAP59103 153 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 GBE1Q04446 702 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 DSC1Q08554 894 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 IFT88Q13099 833 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 SYCP2LQ5T4T6 812 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 LRRC34Q8IZ02 419 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 CACNA2D3Q8IZS8 1091 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 ADAM32Q8TC27 787 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 MLXIPLQ9NP71 852 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 RABGEF1Q9UJ41 708 aa16.68■□□□□ 0.26
AP000253.1-201ENST00000449339 NLRC5Q86WI3 1866 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 VIMP08670 466 aaKnown RBP16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 OR4Q2P0C623 313 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 NR2C2P49116 596 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 ATN1P54259 1190 aaPredicted RBP16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 NME3Q13232 169 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 EFHC2Q5JST6 749 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 C6orf89Q6UWU4 347 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 YTHDF3Q7Z739 585 aaKnown RBP16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 TRABD2AQ86V40 505 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 PALM2Q8IXS6 379 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 CCDC33Q8N5R6 958 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 NT5C3BQ969T7 300 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 MRRFQ96E11 262 aaKnown RBP16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 CABS1Q96KC9 395 aa16.67■□□□□ 0.26
AP000253.1-201ENST00000449339 M0QYT0 321 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 KRT15P19012 456 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 NOS2P35228 1153 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 GEMIN4P57678 1058 aaKnown RBP16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 SLC10A2Q12908 348 aaPredicted RBP16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 RASA2Q15283 850 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 RAB41Q5JT25 222 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 CDKL3Q8IVW4 592 aaPredicted RBP16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 C10orf67Q8IYJ2 551 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 URGCPQ8TCY9 931 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 SLC2A13Q96QE2 648 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 NPY6RQ99463 290 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 TMEM51Q9NW97 253 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 PSMC3IPQ9P2W1 217 aaPredicted RBP16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 HCSTQ9UBK5 93 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 DSEQ9UL01 958 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 FZD10Q9ULW2 581 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 PTPRDP23468 1912 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 ENPP3O14638 875 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 GOT1P17174 413 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 XRCC4Q13426 336 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 PPP1R21Q6ZMI0 780 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 ARHGEF18Q6ZSZ5 1173 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 FBF1Q8TES7 1133 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 SCLYQ96I15 445 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 ACSS3Q9H6R3 686 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 POPDC2Q9HBU9 364 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 PAK6Q9NQU5 681 aaPredicted RBP16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 FETUBQ9UGM5 382 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 CHMP2BQ9UQN3 213 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 MFHAS1Q9Y4C4 1052 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 USP3Q9Y6I4 520 aa16.66■□□□□ 0.26
AP000253.1-201ENST00000449339 ATP2A2P16615 1042 aaKnown RBP16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 ARL4AP40617 200 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 ELK3P41970 407 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 BFSP2Q13515 415 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 SLC45A4Q5BKX6 768 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 BHLHA9Q7RTU4 235 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms