RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TMEM209Q96SK2 561 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRKD2Q9BZL6 878 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SEMA4AQ9H3S1 761 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYLDQ9NQC7 956 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CCDC78A2IDD5 438 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 VSTM5A8MXK1 200 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF217O75362 1048 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 OR4Q2P0C623 313 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 EDNRBP24530 442 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 GNG11P61952 73 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 MPPE1Q53F39 396 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 EMC10Q5UCC4 262 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TTC7BQ86TV6 843 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 OR10G6Q8NH81 332 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 EDEM1Q92611 657 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 KRT12Q99456 494 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 C16orf70Q9BSU1 422 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 MCCC2Q9HCC0 563 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ERVW-1Q9UQF0 538 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 EFCAB7A8K855 629 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLK10O43240 276 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 PEX14O75381 377 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TP53P04637 393 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TKTP29401 623 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 FMO5P49326 533 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZBTB16Q05516 673 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYBPC2Q14324 1141 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 UGCGQ16739 394 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 MON1AQ86VX9 555 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CCDC25Q86WR0 208 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CENPSQ8N2Z9 138 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 AGO3Q9H9G7 860 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 GOLGA2P5Q9HBQ8 144 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TDP1Q9NUW8 608 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADAMTS5Q9UNA0 930 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CPQQ9Y646 472 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SPTA1P02549 2419 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 NCANO14594 1321 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CASQ1P31415 396 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 INHBCP55103 352 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 RPS15P62841 145 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CUL4AQ13619 759 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 DRAP1Q14919 205 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 MLF2Q15773 248 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 AFAP1L2Q8N4X5 818 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 FAM46DQ8NEK8 389 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRPV1Q8NER1 839 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 PAPPA2Q9BXP8 1791 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ACSS2Q9NR19 701 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 FAM114A2Q9NRY5 505 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 PKP3Q9Y446 797 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 HEY1Q9Y5J3 304 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 INSL5Q9Y5Q6 135 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CHURC1-FNTBB4DL54 471 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CEP104O60308 925 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 NADKO95544 446 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 FNTBP49356 437 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMCO3Q6UWJ1 677 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 C11orf57Q6ZUT1 292 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 METTL3Q86U44 580 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ARL14EPQ8N8R7 260 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 VPS39Q96JC1 886 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SERAC1Q96JX3 654 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 PNKPQ96T60 521 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ERVK-5Q9HDB9 667 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 STOML1Q9UBI4 398 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIM43BA6NCK2 446 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF623O75123 536 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 KRT33AO76009 404 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 LTFP02788 710 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 RENBPP51606 427 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ORC1Q13415 861 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TFDP3Q5H9I0 405 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 LHX8Q68G74 356 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SIAH1Q8IUQ4 282 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 SH3RF2Q8TEC5 729 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZCCHC14Q8WYQ9 949 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIM43Q96BQ3 446 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZC4H2Q9NQZ6 224 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 CXXC1Q9P0U4 656 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 DAAM1Q9Y4D1 1078 aa5.82□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIP12Q14669 1992 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ERICH4A6NGS2 130 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 URI1O94763 535 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RHOP08100 348 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PAMP19021 973 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 HNRNPH2P55795 449 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CXADRP78310 365 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 FOXK2Q01167 660 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 NSUN2Q08J23 767 aaKnown RBP eCLIP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF252P-AS1Q0IIN9 211 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANGPT1Q15389 498 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ASTLQ6HA08 431 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 COLGALT2Q8IYK4 626 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GALNT15Q8N3T1 639 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CEP120Q8N960 986 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDKL2Q92772 493 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLK6Q92876 244 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 FEM1CQ96JP0 617 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms