RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 EIF4EBP2Q13542 120 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 PIGHQ14442 188 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZC3H12AQ5D1E8 599 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 STRADAQ7RTN6 431 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 FAM131BQ86XD5 332 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 RIN3Q8TB24 985 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 SH3RF2Q8TEC5 729 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 RNF34Q969K3 372 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 RSPRY1Q96DX4 576 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 PGAP3Q96FM1 320 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 FCRL2Q96LA5 508 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 ASB16Q96NS5 453 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 TDP1Q9NUW8 608 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZMYM5Q9UJ78 669 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 ARHGAP26Q9UNA1 814 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 TLR6Q9Y2C9 796 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 HBS1LQ9Y450 684 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 CAPN6Q9Y6Q1 641 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 KIF26AQ9ULI4 1882 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 LEFTY2O00292 366 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 LRCH4O75427 683 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 STC2O76061 302 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 RNF8O76064 485 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 ENDOD1O94919 500 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 IL9P15248 144 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 TCF4P15884 667 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 DESP17661 470 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 SSR1P43307 286 aaKnown RBP18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 CC2D1AQ6P1N0 951 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 SCYL2Q6P3W7 929 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 NIPA2Q8N8Q9 360 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 SMARCD2Q92925 531 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 SLC39A13Q96H72 371 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 IRX2Q9BZI1 471 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 TMPRSS4Q9NRS4 437 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 CFAP97Q9P2B7 532 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 PCSK1NQ9UHG2 260 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
TRAPPC4-203ENST00000447216 C2CD4DB7Z1M9 353 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 PALMO75781 387 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 MOCS2O96007 188 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 F9P00740 461 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 IGLV3-27P01718 113 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 LAMP2P13473 410 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 COMTP21964 271 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 FCARP24071 287 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 MIPP30301 263 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 CXCR3P49682 368 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 COG7P83436 770 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 NNTQ13423 1086 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 SMAD2Q15796 467 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 SND1Q7KZF4 910 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 OTOP3Q7RTS5 596 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 DAAM2Q86T65 1068 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 RNF10Q8N5U6 811 aaKnown RBP18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 PLD4Q96BZ4 506 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 PEBP4Q96S96 227 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 ANLNQ9NQW6 1124 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 COL6A3P12111 3177 aa18.7■□□□□ 0.58
TRAPPC4-203ENST00000447216 KLKB1P03952 638 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 TNNT1P13805 278 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 CORO1AP31146 461 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 MAN1A1P33908 653 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 GJC1P36383 396 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 KPNA1P52294 538 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 TAS2R40P59535 323 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 USP4Q13107 963 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 TANGO2Q6ICL3 276 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 C11orf63Q6NUN7 778 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 CCDC185Q8N715 623 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 LRRC57Q8N9N7 239 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 TDRD5Q8NAT2 981 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 ACSF2Q96CM8 615 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 LRRC3BQ96PB8 259 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 KXD1Q9BQD3 176 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 PHF7Q9BWX1 381 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 WDCPQ9H6R7 721 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 GPATCH2LQ9NWQ4 482 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 THEGQ9P2T0 379 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 XPO7Q9UIA9 1087 aaKnown RBP18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 SNX10Q9Y5X0 201 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 ALG6Q9Y672 507 aa18.69■□□□□ 0.58
TRAPPC4-203ENST00000447216 DOCK4Q8N1I0 1966 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 I6L893 689 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 SPOPO43791 374 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 FTCDO95954 541 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 IL1R2P27930 398 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 WEE1P30291 646 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 CCR1P32246 355 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 RING1Q06587 406 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 PPP2R5DQ14738 602 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 ACAP1Q15027 740 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 ZNF77Q15935 545 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 TXNRD3NBQ6F5E7 133 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 PARM1Q6UWI2 310 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 DENND1CQ8IV53 801 aa18.68■□□□□ 0.58
TRAPPC4-203ENST00000447216 CELF5Q8N6W0 485 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms