RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 USP29Q9HBJ7 922 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 PRDM8Q9NQV8 689 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 SH3BP4Q9P0V3 963 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 SRP68Q9UHB9 627 aaKnown RBP5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 PCDHB7Q9Y5E2 793 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 PCDHB2Q9Y5E7 798 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 CCDC187A0A096LP49 1063 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 LOC102724159A0A0B4J2E5 919 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 H7C1Q1 480 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 M0QYT0 321 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 ACTL6BO94805 426 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 AKT1P31749 480 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 AP2B1P63010 937 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 TXNL4AP83876 142 aaKnown RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 TFF2Q03403 129 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 CCDC15Q0P6D6 951 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 PWP2Q15269 919 aaKnown RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 FAM187BQ17R55 369 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 BTBD16Q32M84 506 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 P3H1Q32P28 736 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 DENND2CQ68D51 928 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 FBXO42Q6P3S6 717 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 ACSM6Q6P461 480 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 KLHL17Q6TDP4 642 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 TTC30AQ86WT1 665 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 SUGP1Q8IWZ8 645 aaKnown RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 ANKRD42Q8N9B4 389 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 FAM71DQ8N9W8 422 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 NGDNQ8NEJ9 315 aaKnown RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 MAFAQ8NHW3 353 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 WDR60Q8WVS4 1066 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 TBC1D20Q96BZ9 403 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 DAZAP1Q96EP5 407 aaKnown RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 DDX23Q9BUQ8 820 aaKnown RBP5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 MECRQ9BV79 373 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 MYLK2Q9H1R3 596 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 VPS16Q9H269 839 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 KCNK9Q9NPC2 374 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 VPS4AQ9UN37 437 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 CNTN6Q9UQ52 1028 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 WNT6Q9Y6F9 365 aa5.2□□□□□ -1.58
HMGB3P6-201ENST00000444896 KIF28PB7ZC32 967 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 FYB1O15117 783 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 PROP1O75360 226 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 ZNF37AP17032 561 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 MMP8P22894 467 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 IGHMBP2P38935 993 aaKnown RBP5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 POLE2P56282 527 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 RAE1P78406 368 aaKnown RBP5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 GAB1Q13480 694 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 PROSER3Q2NL68 480 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 LDHAL6AQ6ZMR3 332 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 BOLLQ8N9W6 283 aaKnown RBP5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 CCT6BQ92526 530 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 NPIPB3Q92617 1050 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 NELL1Q92832 810 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 CINPQ9BW66 212 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 ABHD10Q9NUJ1 306 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 DAPP1Q9UN19 280 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 SPATA31A6Q5VVP1 1343 aa5.19□□□□□ -1.58
HMGB3P6-201ENST00000444896 RSF1Q96T23 1441 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 CLIC1O00299 241 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 PPP6R2O75170 966 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 C1RP00736 705 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 PROK1P58294 105 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 MFSD13AQ14CX5 517 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 TIGD6Q17RP2 521 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 AWAT1Q58HT5 328 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 ATPAF1Q5TC12 328 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 CHSY1Q86X52 802 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 CCDC117Q8IWD4 279 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 GALNT15Q8N3T1 639 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 SPATA5Q8NB90 893 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 ADAMTS18Q8TE60 1221 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 GLMPQ8WWB7 406 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 RITA1Q96K30 269 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 EIF3CQ99613 913 aaKnown RBP5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 MYH16Q9H6N6 1097 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 TFCP2L1Q9NZI6 479 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 ZBTB1Q9Y2K1 713 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 GPR52Q9Y2T5 361 aa5.18□□□□□ -1.58
HMGB3P6-201ENST00000444896 C16orf96A6NNT2 1141 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 FAM155BO75949 473 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 DHRS4L1P0CG22 281 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 CYP2D6P10635 497 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 PEPDP12955 493 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 DUSP1P28562 367 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 JAK3P52333 1124 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 ELLP55199 621 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 FAM3BP58499 235 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 NANOS3P60323 173 aaKnown RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 PRKG1Q13976 671 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 LARS2Q15031 903 aaKnown RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 AAK1Q2M2I8 961 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 GORABQ5T7V8 394 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 TTC22Q5TAA0 569 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 KYAT3Q6YP21 454 aaKnown RBP5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 KRT27Q7Z3Y8 459 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 RD3Q7Z3Z2 195 aa5.17□□□□□ -1.58
HMGB3P6-201ENST00000444896 PRIMA1Q86XR5 153 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms