RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TLR8Q9NR97 1041 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 VPS45Q9NRW7 570 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 RNF19AQ9NV58 838 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 MIOSQ9NXC5 875 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 MTMR10Q9NXD2 777 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NSMCE4AQ9NXX6 385 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 EURLQ9NYK6 297 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 KLK14Q9P0G3 267 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 IGSF9Q9P2J2 1179 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 MTRRQ9UBK8 725 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 UXTQ9UBK9 157 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 HMGXB4Q9UGU5 601 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 AFF4Q9UHB7 1163 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ASIC3Q9UHC3 531 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 SLC12A6Q9UHW9 1150 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF180Q9UJW8 692 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ANAPC5Q9UJX4 755 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 LRFN2Q9ULH4 789 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ZMYND8Q9ULU4 1186 aaPredicted RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 AP4E1Q9UPM8 1137 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 TLR6Q9Y2C9 796 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 FAN1Q9Y2M0 1017 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NR2E1Q9Y466 385 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 NME7Q9Y5B8 376 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 HTTP42858 3142 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 KIAA1671Q9BY89 1806 aa2.93□□□□□ -1.94
LINC00393-201ENST00000443621 ATXN2Q99700 1313 aaKnown RBP2.93□□□□□ -1.94
LINC00393-201ENST00000443621 A0A0A0MRY4 1105 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZSCAN5CA6NGD5 496 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CASTOR2A6NHX0 329 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DRGXA6NNA5 263 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 YJEFN3A6XGL0 299 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 KCNU1A8MYU2 1149 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 E7ENQ6 273 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GOLGA8SH3BPF8 625 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 M0QYT0 321 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RASGRF2O14827 1237 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DCLK1O15075 740 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RNF40O75150 1001 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GABBR2O75899 941 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ALDH1A2O94788 518 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DDHD2O94830 711 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SNUPNO95149 360 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 POMCP01189 267 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 IL1BP01584 269 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 FYNP06241 537 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RB1P06400 928 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ATP5BP06576 529 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CLTBP09497 229 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PDGFRBP09619 1106 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CTSHP09668 335 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HAPLN1P10915 354 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 NCAM1P13591 858 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC130P13994 396 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TCF3P15923 654 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RHOQP17081 205 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CYP2F1P24903 491 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DDX6P26196 483 aaKnown RBP eCLIP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 YWHAQP27348 245 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ADORA2BP29275 332 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TKTP29401 623 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 OAS2P29728 719 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HOXA9P31269 272 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GGCXP38435 758 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GRIK1P39086 918 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SSR1P43307 286 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MAGEA4P43358 317 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TNNT3P45378 269 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MAPKAPK2P49137 400 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 NPY2RP49146 381 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SULT1E1P49888 294 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SERPINB9P50453 376 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GUCY2FP51841 1108 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ITGA8P53708 1063 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SLC5A3P53794 718 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MAP3K7CLP57077 242 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 EIF3EP60228 445 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 IRX5P78411 483 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HTRA4P83105 476 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RBM10P98175 930 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SLC7A5Q01650 507 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ROR1Q01973 937 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF844Q08AG5 666 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ADIGQ0VDE8 80 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GALNT2Q10471 571 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF211Q13398 564 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SLC12A1Q13621 1099 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HNRNPDQ14103 355 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DPYSQ14117 519 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 KRT81Q14533 505 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SLC29A2Q14542 456 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RFTN1Q14699 578 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PRKD1Q15139 912 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TRIP4Q15650 581 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HIF1AQ16665 826 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PARP15Q460N3 678 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CTXN3Q4LDR2 81 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms