RNA–Protein interactions for RNA: ENST00000443509.6

PRUNE2-208, Transcript of prune homolog 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRUNE2, Length 12,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-208ENST00000443509 SLC12A4Q9UP95 1085 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 PTPN22Q9Y2R2 807 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TPRKBQ9Y3C4 175 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TMEM247A6NEH6 219 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RGS5O15539 181 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 HOXA2O43364 376 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SNRPAP09012 282 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SERPINB5P36952 375 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CSE1LP55060 971 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SMARCB1Q12824 385 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TMEM132DQ14C87 1099 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 EMC2Q15006 297 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 NAPEPLDQ6IQ20 393 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 NIPAL1Q6NVV3 410 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 C16orf62Q7Z3J2 963 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 PSMA8Q8TAA3 256 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TMCO6Q96DC7 493 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 MTMR9Q96QG7 549 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 FSD1LQ9BXM9 530 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ANKHQ9HCJ1 492 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 GNPTGQ9UJJ9 305 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 AKAP10O43572 662 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SIN3BO75182 1162 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 UQCRBP14927 111 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SLC9A1P19634 815 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 PGDP52209 483 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RAD23AP54725 363 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 C1DQ13901 141 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 C4orf50Q6ZRC1 276 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ARCQ7LC44 396 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ZNF354CQ86Y25 554 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 GLMNQ92990 594 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 THTPAQ9BU02 230 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SMYD3Q9H7B4 428 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 DRG1Q9Y295 367 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 KCNK1O00180 336 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TEX28O15482 410 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SRGAP2O75044 1071 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 MTA2O94776 668 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 DNAJB1P25685 340 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TUFMP49411 452 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 LGALS3BPQ08380 585 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TRIQKQ629K1 86 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SCARA3Q6AZY7 606 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 KYAT3Q6YP21 454 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CAPN12Q6ZSI9 719 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TDRD5Q8NAT2 981 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RASGRP4Q8TDF6 673 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RNF139Q8WU17 664 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 COA7Q96BR5 231 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 KCNH7Q9NS40 1196 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RAPGEFL1Q9UHV5 662 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 DERAQ9Y315 318 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 PCP4L1A6NKN8 68 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 H7C2Y5 167 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TSPAN1O60635 241 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ANXA9O76027 345 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 NPR2P20594 1047 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CPT1AP50416 773 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CYP4F2P78329 520 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CYP4F8P98187 520 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CYP4F3Q08477 520 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TCEAL1Q15170 157 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 LZTR1Q8N653 840 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RDH11Q8TC12 318 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 OSCP1Q8WVF1 389 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 STARD8Q92502 1023 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 EMILIN2Q9BXX0 1053 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TMEM5Q9Y2B1 443 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ANKRD12Q6UB98 2062 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TAF1LQ8IZX4 1826 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 METTL21EPA6NDL7 271 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CXCL11O14625 94 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SMNDC1O75940 238 aaKnown RBP eCLIP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 USP1O94782 785 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ZNF806P0C7X5 589 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CES1P23141 567 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 RAD51Q06609 339 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SNAPC2Q13487 334 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 IZUMO3Q5VZ72 239 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TTBK2Q6IQ55 1244 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ILDR1Q86SU0 546 aaPredicted RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 MARCH10Q8NA82 808 aaPredicted RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 DPF3Q92784 378 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 DDX17Q92841 729 aaKnown RBP4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 SLCO2A1Q92959 643 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 MS4A14Q96JA4 679 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 CHCHD6Q9BRQ6 235 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 TMEM134Q9H6X4 195 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 HMGCRP04035 888 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 PRR29P0C7W0 189 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 MSR1P21757 451 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 EPHB1P54762 984 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 S100A12P80511 92 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 NFIAQ12857 509 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 ACAD10Q6JQN1 1059 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 UGT3A1Q6NUS8 523 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 DNAAF3Q8N9W5 541 aa4.81□□□□□ -1.64
PRUNE2-208ENST00000443509 HDAC11Q96DB2 347 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms