RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ADCY3O60266 1144 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 ICAM1P05362 532 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 RBL1P28749 1068 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 GALK1P51570 392 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 HMGCS2P54868 508 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 PGM2L1Q6PCE3 622 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 ADGRG6Q86SQ4 1221 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
PCNX3-202ENST00000439247 PIWIL2Q8TC59 973 aaKnown RBP14□□□□□ -0.17
PCNX3-202ENST00000439247 IFT122Q9HBG6 1241 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 EMCNQ9ULC0 261 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 APOBEC2Q9Y235 224 aaKnown RBP14□□□□□ -0.17
PCNX3-202ENST00000439247 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
PCNX3-202ENST00000439247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 GRAP2O75791 330 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 CLPTM1O96005 669 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 PENKP01210 267 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ALDH1A3P47895 512 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 SLC1A6P48664 564 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 IDH3AP50213 366 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 CDH6P55285 790 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 TMEM62Q0P6H9 643 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 WASHC5Q12768 1159 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 DPH6Q7L8W6 267 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 TTC13Q8NBP0 860 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 DGCR14Q96DF8 476 aaKnown RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 DCUN1D1Q96GG9 259 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 CCDC28BQ9BUN5 200 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 THAP1Q9NVV9 213 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ZNF358Q9NW07 568 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 DTNAQ9Y4J8 743 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 PCDHA10Q9Y5I2 948 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 SLC15A5A6NIM6 579 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 FGF3P11487 239 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 TBXAS1P24557 533 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 FDFT1P37268 417 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 CDH8P55286 799 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 HPCAP84074 193 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 SNAPC2Q13487 334 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 MBLAC2Q68D91 279 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 NIPA2Q8N8Q9 360 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 MIS12Q9H081 205 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ZNF408Q9H9D4 720 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 NXF1Q9UBU9 619 aaKnown RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 A0A0J9YVX5 310 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 E9PBE3 544 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 PDLIM1O00151 329 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ZSCAN9O15535 394 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 KLHL41O60662 606 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 DNAJA2O60884 412 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ERBB2P04626 1255 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 KRT7P08729 469 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 OSBPP22059 807 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ACAP1Q15027 740 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 C15orf59Q2T9L4 293 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 PPM1JQ5JR12 505 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 C6orf52Q5T4I8 152 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 N4BP2L1Q5TBK1 243 aaPredicted RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 WDR75Q8IWA0 830 aaKnown RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 GALNT4Q8N4A0 578 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 UBR7Q8N806 425 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ZNF280CQ8ND82 737 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 CEP70Q8NHQ1 597 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 PGBD4Q96DM1 585 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 PRPF18Q99633 342 aaKnown RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 RNPEPQ9H4A4 650 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 LIN28AQ9H9Z2 209 aaKnown RBP13.99□□□□□ -0.17
PCNX3-202ENST00000439247 TMEM165Q9HC07 324 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 USP18Q9UMW8 372 aa13.99□□□□□ -0.17
PCNX3-202ENST00000439247 ZBTB14O43829 449 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 APOEP02649 317 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 NELFEP18615 380 aaKnown RBP13.98□□□□□ -0.17
PCNX3-202ENST00000439247 JAK3P52333 1124 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 BACE1P56817 501 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 PRKCEQ02156 737 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 HADHQ16836 314 aaKnown RBP13.98□□□□□ -0.17
PCNX3-202ENST00000439247 PDPK2PQ6A1A2 396 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 DUS1LQ6P1R4 473 aaKnown RBP13.98□□□□□ -0.17
PCNX3-202ENST00000439247 SDCCAG8Q86SQ7 713 aaPredicted RBP13.98□□□□□ -0.17
PCNX3-202ENST00000439247 C10orf107Q8IVU9 208 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 TRIM42Q8IWZ5 723 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 PIWIL1Q96J94 861 aaKnown RBP13.98□□□□□ -0.17
PCNX3-202ENST00000439247 CGRRF1Q99675 332 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 PDCD2LQ9BRP1 358 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 NMRK2Q9NPI5 230 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 SMIM31A0A1B0GVY4 71 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 IQCA1LA6NCM1 817 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 NDC80O14777 642 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 TRPA1O75762 1119 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 CDK4P11802 303 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 L1CAMP32004 1257 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 MYBPC1Q00872 1141 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 TMED1Q13445 227 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 PDK1Q15118 436 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 THNSL1Q8IYQ7 743 aa13.98□□□□□ -0.17
PCNX3-202ENST00000439247 NETO2Q8NC67 525 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms