RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 CDH8P55286 799 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 KCNK10P57789 538 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 CUL3Q13618 768 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 ZDHHC6Q9H6R6 413 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 EVPLLA8MZ36 301 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 YBX3P16989 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 MMGT1Q8N4V1 131 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 B3GALNT2Q8NCR0 500 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 MRPL1Q9BYD6 325 aaKnown RBP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 IARS2Q9NSE4 1012 aaKnown RBP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 GID8Q9NWU2 228 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 NFICP08651 508 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 ARHGEF19Q8IW93 802 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 RFWD2Q8NHY2 731 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 CELF6Q96J87 481 aaKnown RBP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 ZSCAN9O15535 394 aaPredicted RBP16.05■□□□□ 0.16
NEDD4-202ENST00000435532 BMP10O95393 424 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 KRT20P35900 424 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 CDH17Q12864 832 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 FAXCQ5TGI0 409 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 WNT8BQ93098 351 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 ARL8AQ96BM9 186 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 INPP4AQ96PE3 977 aaPredicted RBP16.05■□□□□ 0.16
NEDD4-202ENST00000435532 GANQ9H2C0 597 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 SMARCAL1Q9NZC9 954 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 DTNAQ9Y4J8 743 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 A0A087X0T9 212 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 FAM228BP0C875 321 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 DARSP14868 501 aaKnown RBP16.05■□□□□ 0.16
NEDD4-202ENST00000435532 FPGSQ05932 587 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 NFIL3Q16649 462 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 SERPINA13PQ6UXR4 307 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 SPPL2BQ8TCT7 592 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 MAGEC3Q8TD91 643 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 ING2Q9H160 280 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 GLRA3O75311 464 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 CRHR2Q13324 411 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 SCUBE3Q8IX30 993 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 HIPK4Q8NE63 616 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 RBBP8Q99708 897 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 RNPEPQ9H4A4 650 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 BRD9Q9H8M2 597 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 AHSPQ9NZD4 102 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 ROBO3Q96MS0 1386 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 TADA3O75528 432 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 LYPLA2O95372 231 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 RBP1P09455 135 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 NPY2RP49146 381 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 C21orf59P57076 290 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 CNGA2Q16280 664 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 C2CD6Q53TS8 623 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 PANX3Q96QZ0 392 aa16.05■□□□□ 0.16
NEDD4-202ENST00000435532 POLR1EQ9GZS1 481 aaKnown RBP16.05■□□□□ 0.16
NEDD4-202ENST00000435532 MRPS17Q9Y2R5 130 aaKnown RBP16.05■□□□□ 0.16
NEDD4-202ENST00000435532 ICAM3P32942 547 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 PKN2Q16513 984 aaKnown RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 TMEM161BQ8NDZ6 487 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 MEI4A8MW99 385 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 NFKBIEO00221 500 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 MMP13P45452 471 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 LONRF1Q17RB8 773 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 TSHZ1Q6ZSZ6 1077 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 PIK3R5Q8WYR1 880 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 WDR24Q96S15 920 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 PNKPQ96T60 521 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 BLOC1S4Q9NUP1 217 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 CDV3Q9UKY7 258 aaKnown RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 RAD51CO43502 376 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 MLNP12872 115 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 CAPZA2P47755 286 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 LRRC14Q15048 493 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 CTU1Q7Z7A3 348 aaKnown RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 NR1H4Q96RI1 486 aaPredicted RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 AVENQ9NQS1 362 aaPredicted RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 RNF103-CHMP3A0A140T963 221 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 CCNG2Q16589 344 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 GLT6D1Q7Z4J2 308 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 MCOLN3Q8TDD5 553 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 C12orf42Q96LP6 360 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 TBC1D14Q9P2M4 693 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 FAM153AQ9UHL3 310 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 VANGL2Q9ULK5 521 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 SNX5Q9Y5X3 404 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 ZBTB39O15060 712 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 APODP05090 189 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 CDH2P19022 906 aaPredicted RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 SETD3Q86TU7 594 aaPredicted RBP16.04■□□□□ 0.16
NEDD4-202ENST00000435532 SERAC1Q96JX3 654 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 CTNNAL1Q9UBT7 734 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
NEDD4-202ENST00000435532 TBL1XO60907 577 aa16.03■□□□□ 0.16
NEDD4-202ENST00000435532 FGRP09769 529 aa16.03■□□□□ 0.16
NEDD4-202ENST00000435532 FGFR1P11362 822 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms