RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 DPYSQ14117 519 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 DSC3Q14574 896 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 PRKD1Q15139 912 aaPredicted RBP14.45□□□□□ -0.1
HOXC4-202ENST00000430889 KBTBD12Q3ZCT8 623 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 SYPL2Q5VXT5 272 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 PRPF39Q86UA1 669 aaKnown RBP14.45□□□□□ -0.1
HOXC4-202ENST00000430889 FAM35AQ86V20 835 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 RNF169Q8NCN4 708 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 ALKBH8Q96BT7 664 aaKnown RBP14.45□□□□□ -0.1
HOXC4-202ENST00000430889 SIGLEC10Q96LC7 697 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 SYT15Q9BQS2 421 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
HOXC4-202ENST00000430889 KRT82Q9NSB4 513 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 DDX43Q9NXZ2 648 aaKnown RBP14.45□□□□□ -0.1
HOXC4-202ENST00000430889 ARL2BPQ9Y2Y0 163 aa14.45□□□□□ -0.1
HOXC4-202ENST00000430889 ARL5CA6NH57 179 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 MFSD11O43934 449 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 ZNF623O75123 536 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 FBXO21O94952 628 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 FAM200BP0CF97 657 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 NEK3P51956 506 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 DAOAP59103 153 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 MGAT5Q09328 741 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 SCAPQ12770 1279 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 SEMA3BQ13214 749 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 PAFAH1B3Q15102 231 aaKnown RBP14.44□□□□□ -0.1
HOXC4-202ENST00000430889 ZKSCAN8Q15776 578 aaPredicted RBP14.44□□□□□ -0.1
HOXC4-202ENST00000430889 DCAF6Q58WW2 860 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 SYCP2LQ5T4T6 812 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 FBXW10Q5XX13 1052 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 RNF43Q68DV7 783 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 CD300LGQ6UXG3 332 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 RSPH3Q86UC2 560 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 ANKLE1Q8NAG6 615 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 RNF139Q8WU17 664 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 LPPQ93052 612 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 PGAP3Q96FM1 320 aaPredicted RBP14.44□□□□□ -0.1
HOXC4-202ENST00000430889 SLC9A7Q96T83 725 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 RTP3Q9BQQ7 232 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 WDR6Q9NNW5 1121 aaKnown RBP14.44□□□□□ -0.1
HOXC4-202ENST00000430889 PIGVQ9NUD9 493 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 ZNF180Q9UJW8 692 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 GABRQQ9UN88 632 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 STARD13Q9Y3M8 1113 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 PTCH2Q9Y6C5 1203 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 MYO18AQ92614 2054 aaKnown RBP14.44□□□□□ -0.1
HOXC4-202ENST00000430889 THSD7BQ9C0I4 1608 aa14.44□□□□□ -0.1
HOXC4-202ENST00000430889 A0A0A0MRY4 1105 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 MYBPHLA2RUH7 354 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 I6L893 689 aaPredicted RBP14.43□□□□□ -0.1
HOXC4-202ENST00000430889 TRDMT1O14717 391 aaKnown RBP14.43□□□□□ -0.1
HOXC4-202ENST00000430889 DCLK1O15075 740 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 TM9SF1O15321 606 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 MGEA5O60502 916 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 PGK1P00558 417 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 RPLP2P05387 115 aaKnown RBP14.43□□□□□ -0.1
HOXC4-202ENST00000430889 APRTP07741 180 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 DHRS4L1P0CG22 281 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 CA4P22748 312 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 RPL9P32969 192 aaKnown RBP14.43□□□□□ -0.1
HOXC4-202ENST00000430889 TKTL1P51854 596 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 CACNA2D1P54289 1103 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 SLC8A3P57103 927 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 UPP1Q16831 310 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 CCSAPQ6IQ19 270 aaPredicted RBP14.43□□□□□ -0.1
HOXC4-202ENST00000430889 GPRIN1Q7Z2K8 1008 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 HACE1Q8IYU2 909 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 VPS52Q8N1B4 723 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 SPOCK2Q92563 424 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 NTAN1Q96AB6 310 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 FAM149B1Q96BN6 582 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 MRRFQ96E11 262 aaKnown RBP14.43□□□□□ -0.1
HOXC4-202ENST00000430889 SPATA13Q96N96 652 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 PLCD4Q9BRC7 762 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 ULBP1Q9BZM6 244 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 LRRC4Q9HBW1 653 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 CSNK1G1Q9HCP0 422 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 TMPRSS4Q9NRS4 437 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 CDH9Q9ULB4 789 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 STAP1Q9ULZ2 295 aa14.43□□□□□ -0.1
HOXC4-202ENST00000430889 H3BRJ5 948 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 SEPT4O43236 478 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 CA12O43570 354 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 EDF1O60869 148 aaKnown RBP14.42□□□□□ -0.1
HOXC4-202ENST00000430889 ALADP13716 330 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 ARL4AP40617 200 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 ETV4P43268 484 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 TM4SF4P48230 202 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 GLUD2P49448 558 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 SCNN1GP51170 649 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 AIF1P55008 147 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 YWHAGP61981 247 aaKnown RBP eCLIP14.42□□□□□ -0.1
HOXC4-202ENST00000430889 FAAP100Q0VG06 881 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 SF3A3Q12874 501 aaKnown RBP eCLIP14.42□□□□□ -0.1
HOXC4-202ENST00000430889 PTK7Q13308 1070 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 STEAP4Q687X5 459 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 KLHDC9Q8NEP7 349 aa14.42□□□□□ -0.1
HOXC4-202ENST00000430889 TFB1MQ8WVM0 346 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms