RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 FBXO10Q9UK96 956 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 KIAA1257Q9ULG3 409 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 ZNF510Q9Y2H8 683 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.89■□□□□ 0.13
USB1-202ENST00000423271 PLXND1Q9Y4D7 1925 aa15.89■□□□□ 0.13
USB1-202ENST00000423271 A0A1W2PQF6 199 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 BCLAF3A2AJT9 711 aaKnown RBP15.88■□□□□ 0.13
USB1-202ENST00000423271 FOXD2O60548 495 aaPredicted RBP15.88■□□□□ 0.13
USB1-202ENST00000423271 GABRG2P18507 467 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 NTSR1P30989 418 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 GCNT1Q02742 428 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 MAP7D1Q3KQU3 841 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 SASS6Q6UVJ0 657 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 C11orf74Q86VG3 221 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 CHPFQ8IZ52 775 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 PGBD3Q8N328 593 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 CLEC4CQ8WTT0 213 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 SLC35F5Q8WV83 523 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 PLD4Q96BZ4 506 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 CD248Q9HCU0 757 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 VPS45Q9NRW7 570 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 OLA1Q9NTK5 396 aaKnown RBP15.88■□□□□ 0.13
USB1-202ENST00000423271 CACNA2D2Q9NY47 1150 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 MBD1Q9UIS9 605 aaPredicted RBP15.88■□□□□ 0.13
USB1-202ENST00000423271 CLEC4EQ9ULY5 219 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 RAD54BQ9Y620 910 aa15.88■□□□□ 0.13
USB1-202ENST00000423271 MSI1O43347 362 aaKnown RBP15.87■□□□□ 0.13
USB1-202ENST00000423271 CAVIN2O95810 425 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 ERCC5P28715 1186 aaPredicted RBP15.87■□□□□ 0.13
USB1-202ENST00000423271 CHKAP35790 457 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 DHPSP49366 369 aaPredicted RBP15.87■□□□□ 0.13
USB1-202ENST00000423271 MFAP3P55082 362 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 TRIP4Q15650 581 aaPredicted RBP15.87■□□□□ 0.13
USB1-202ENST00000423271 CNGA2Q16280 664 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 GEN1Q17RS7 908 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 KIAA1211LQ6NV74 962 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 FAM217AQ8IXS0 508 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 SCML4Q8N228 414 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 RNF139Q8WU17 664 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 SPACA7Q96KW9 195 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 GABRG3Q99928 467 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 CNGB3Q9NQW8 809 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 CALCOCO1Q9P1Z2 691 aa15.87■□□□□ 0.13
USB1-202ENST00000423271 TNRC6BQ9UPQ9 1833 aaKnown RBP15.87■□□□□ 0.13
USB1-202ENST00000423271 WASH3PC4AMC7 463 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 LIMK1P53667 647 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 STILQ15468 1287 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 GJB7Q6PEY0 223 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 C11orf57Q6ZUT1 292 aaPredicted RBP15.86■□□□□ 0.13
USB1-202ENST00000423271 ARMCX6Q7L4S7 300 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 CYP2U1Q7Z449 544 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 CPXM2Q8N436 756 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 IPO4Q8TEX9 1081 aaKnown RBP15.86■□□□□ 0.13
USB1-202ENST00000423271 SLC6A17Q9H1V8 727 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 ABCC13Q9NSE7 274 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 ANO10Q9NW15 660 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 SLC27A6Q9Y2P4 619 aa15.86■□□□□ 0.13
USB1-202ENST00000423271 HBS1LQ9Y450 684 aaKnown RBP15.86■□□□□ 0.13
USB1-202ENST00000423271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 PATE3B3GLJ2 98 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 TSPAN3O60637 253 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 KRT5P13647 590 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 NDUFV2P19404 249 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 PTGER3P43115 390 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 APBA1Q02410 837 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 STX1AQ16623 288 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 STPG1Q5TH74 334 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 MSANTD2Q6P1R3 559 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 TMEFF1Q8IYR6 380 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 DDI1Q8WTU0 396 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 PIWIL1Q96J94 861 aaKnown RBP15.85■□□□□ 0.13
USB1-202ENST00000423271 CRACR2AQ9BSW2 395 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 MIS12Q9H081 205 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 UBE2TQ9NPD8 197 aaPredicted RBP15.85■□□□□ 0.13
USB1-202ENST00000423271 ACP6Q9NPH0 428 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 CD93Q9NPY3 652 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 CNTN6Q9UQ52 1028 aa15.85■□□□□ 0.13
USB1-202ENST00000423271 TPRP12270 2363 aaKnown RBP15.84■□□□□ 0.13
USB1-202ENST00000423271 LNP1A1A4G5 178 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 GFRA2O00451 464 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 MAP3K13O43283 966 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 FGFR1OPO95684 399 aaKnown RBP15.84■□□□□ 0.13
USB1-202ENST00000423271 LTFP02788 710 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 CYBBP04839 570 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 HOXD9P28356 352 aaPredicted RBP15.84■□□□□ 0.13
USB1-202ENST00000423271 HARS2P49590 506 aaKnown RBP15.84■□□□□ 0.13
USB1-202ENST00000423271 TYRO3Q06418 890 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 NFKBIBQ15653 356 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 TPD52L1Q16890 204 aaPredicted RBP15.84■□□□□ 0.13
USB1-202ENST00000423271 CT47A1Q5JQC4 288 aaPredicted RBP15.84■□□□□ 0.13
USB1-202ENST00000423271 PPM1JQ5JR12 505 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 IL31Q6EBC2 164 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 SDE2Q6IQ49 451 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 TRIM65Q6PJ69 517 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 LPCAT2Q7L5N7 544 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 ANKS1BQ7Z6G8 1248 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 IRF2BP1Q8IU81 584 aa15.84■□□□□ 0.13
USB1-202ENST00000423271 CREBRFQ8IUR6 639 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms