RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PLD4Q96BZ4 506 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 GSDMAQ96QA5 445 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 GTPBP2Q9BX10 602 aaKnown RBP18.11■□□□□ 0.49
PTCD1-202ENST00000419981 ULBP1Q9BZM6 244 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 SLC6A17Q9H1V8 727 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 CD93Q9NPY3 652 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 FSCN3Q9NQT6 498 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 OLA1Q9NTK5 396 aaKnown RBP18.11■□□□□ 0.49
PTCD1-202ENST00000419981 HESX1Q9UBX0 185 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 TSPAN16Q9UKR8 245 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 COQ4Q9Y3A0 265 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 STON1Q9Y6Q2 735 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 NUMA1Q14980 2115 aa18.11■□□□□ 0.49
PTCD1-202ENST00000419981 XPO1O14980 1071 aaKnown RBP18.1■□□□□ 0.49
PTCD1-202ENST00000419981 NPC1O15118 1278 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 PDE4CQ08493 712 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 BST2Q10589 180 aaKnown RBP18.1■□□□□ 0.49
PTCD1-202ENST00000419981 CUL2Q13617 745 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 E2F5Q15329 346 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 GEN1Q17RS7 908 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 SGO2Q562F6 1265 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 PM20D1Q6GTS8 502 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 ANKS1BQ7Z6G8 1248 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 ZC3H3Q8IXZ2 948 aaKnown RBP18.1■□□□□ 0.49
PTCD1-202ENST00000419981 FMR1NBQ8N0W7 255 aaPredicted RBP18.1■□□□□ 0.49
PTCD1-202ENST00000419981 HDDC3Q8N4P3 179 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 LRRC4Q9HBW1 653 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 CAPN10Q9HC96 672 aa18.1■□□□□ 0.49
PTCD1-202ENST00000419981 THAP10Q9P2Z0 257 aaPredicted RBP18.1■□□□□ 0.49
PTCD1-202ENST00000419981 GOLGA6L4A6NEF3 574 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 TULP2O00295 520 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 CD19P15391 556 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 IL12RB1P42701 662 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 ZNF132P52740 706 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 FUT11Q495W5 492 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 ANKRD40Q6AI12 368 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 FAM217AQ8IXS0 508 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 RGL4Q8IZJ4 473 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 DDI1Q8WTU0 396 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 FOXJ1Q92949 421 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 PIWIL1Q96J94 861 aaKnown RBP18.09■□□□□ 0.49
PTCD1-202ENST00000419981 IPO9Q96P70 1041 aaKnown RBP18.09■□□□□ 0.49
PTCD1-202ENST00000419981 PRDM16Q9HAZ2 1276 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 PTPRBP23467 1997 aa18.09■□□□□ 0.49
PTCD1-202ENST00000419981 TRIM49BA6NDI0 452 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SYNCRIPO60506 623 aaKnown RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 OPHN1O60890 802 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SMC2O95347 1197 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SYPP08247 313 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 TBXAS1P24557 533 aaPredicted RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 LRRC63Q05C16 580 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 ADIGQ0VDE8 80 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SEMA3BQ13214 749 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 ENPP2Q13822 863 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 EIF4HQ15056 248 aaKnown RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SYCP2LQ5T4T6 812 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 UNQ6494/PRO21346Q6UXR6 183 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 BHLHA9Q7RTU4 235 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 FMNL3Q8IVF7 1028 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 MINDY1Q8N5J2 469 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 RNF139Q8WU17 664 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 NDRG1Q92597 394 aaKnown RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SMARCE1Q969G3 411 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 ZNF419Q96HQ0 510 aaPredicted RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SLC2A11Q9BYW1 496 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 GTPBP4Q9BZE4 634 aaKnown RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 SUSD2Q9UGT4 822 aa18.08■□□□□ 0.48
PTCD1-202ENST00000419981 ARMCX3Q9UH62 379 aaPredicted RBP18.08■□□□□ 0.48
PTCD1-202ENST00000419981 PLXNA2O75051 1894 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 UPK3BL1B0FP48 263 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 UPK3BL2E5RIL1 263 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 ARHGAP33O14559 1287 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 PROS1P07225 676 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 VDRP11473 427 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 CD6P30203 668 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 HARS2P49590 506 aaKnown RBP18.07■□□□□ 0.48
PTCD1-202ENST00000419981 ZNF234Q14588 700 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 TRIP4Q15650 581 aaPredicted RBP18.07■□□□□ 0.48
PTCD1-202ENST00000419981 PIP4P1Q86T03 277 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 METTL3Q86U44 580 aaKnown RBP18.07■□□□□ 0.48
PTCD1-202ENST00000419981 SIX6OS1Q8N1H7 587 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 SLC35C1Q96A29 364 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 ADAM33Q9BZ11 813 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 CIPCQ9C0C6 399 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 MKRN2Q9H000 416 aaKnown RBP18.07■□□□□ 0.48
PTCD1-202ENST00000419981 ELOVL2Q9NXB9 296 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 USP36Q9P275 1121 aaKnown RBP18.07■□□□□ 0.48
PTCD1-202ENST00000419981 CLEC4EQ9ULY5 219 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 WASF3Q9UPY6 502 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 HBS1LQ9Y450 684 aaKnown RBP18.07■□□□□ 0.48
PTCD1-202ENST00000419981 FRYQ5TBA9 3013 aa18.07■□□□□ 0.48
PTCD1-202ENST00000419981 MEI4A8MW99 385 aa18.06■□□□□ 0.48
PTCD1-202ENST00000419981 C1QTNF9BB2RNN3 333 aa18.06■□□□□ 0.48
PTCD1-202ENST00000419981 TOP3BO95985 862 aaKnown RBP18.06■□□□□ 0.48
PTCD1-202ENST00000419981 C1QTNF9P0C862 333 aa18.06■□□□□ 0.48
PTCD1-202ENST00000419981 SETSIPP0DME0 302 aa18.06■□□□□ 0.48
PTCD1-202ENST00000419981 GNSP15586 552 aa18.06■□□□□ 0.48
PTCD1-202ENST00000419981 SPINK2P20155 84 aa18.06■□□□□ 0.48
PTCD1-202ENST00000419981 ARID5AQ03989 594 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms