RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ITGADQ13349 1161 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 MSLNQ13421 630 aaPredicted RBP12.06□□□□□ -0.48
DDR1-232ENST00000418800 PIGHQ14442 188 aaPredicted RBP12.06□□□□□ -0.48
DDR1-232ENST00000418800 PPM1JQ5JR12 505 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 SPDYAQ5MJ70 313 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 PERM1Q5SV97 790 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 SH3PXD2AQ5TCZ1 1133 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 PQLC1Q8N2U9 271 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 TMEM130Q8N3G9 435 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 DNAAF3Q8N9W5 541 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 CMTM5Q96DZ9 223 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 ZMAT2Q96NC0 199 aaKnown RBP12.06□□□□□ -0.48
DDR1-232ENST00000418800 KCNK16Q96T55 309 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 HAUS8Q9BT25 410 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
DDR1-232ENST00000418800 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 ZNF358Q9NW07 568 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 DMTF1Q9Y222 760 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 CNTNAP2Q9UHC6 1331 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 SLC1A6P48664 564 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 PRKD1Q15139 912 aaPredicted RBP12.06□□□□□ -0.48
DDR1-232ENST00000418800 OGFOD2Q6N063 350 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 DCAKDQ8WVC6 231 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 GAB3Q8WWW8 586 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 SLC7A3Q8WY07 619 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 LZICQ8WZA0 190 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 NLRP4Q96MN2 994 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 TSNARE1Q96NA8 513 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 RIT2Q99578 217 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 FAM49BQ9NUQ9 324 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 RNF19AQ9NV58 838 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
DDR1-232ENST00000418800 RAP1GDS1P52306 607 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 WNT7BP56706 349 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 GCNT1Q02742 428 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 PLOD1Q02809 727 aaPredicted RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 DLGAP5Q15398 846 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 GEN1Q17RS7 908 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 BHLHE22Q8NFJ8 381 aaPredicted RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 SLCO2A1Q92959 643 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 MBOAT7Q96N66 472 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 PGLYRP2Q96PD5 576 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 FERMT1Q9BQL6 677 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 TMEM39BQ9GZU3 492 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 KLHL25Q9H0H3 589 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 AURKCQ9UQB9 309 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 PCDHA10Q9Y5I2 948 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 RNF103-CHMP3A0A140T963 221 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 VILLO15195 856 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 NDUFB5O43674 189 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 USP12O75317 370 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 APOEP02649 317 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 MIPP30301 263 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 GRIA1P42261 906 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 CDKN2BP42772 138 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 C21orf59P57076 290 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 BAATQ14032 418 aaPredicted RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 NEDD8Q15843 81 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 DLK2Q6UY11 383 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 SERPINI1Q99574 410 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 WDR55Q9H6Y2 383 aaPredicted RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 DDX56Q9NY93 547 aaKnown RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 WARS2Q9UGM6 360 aaKnown RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 A0A088AWK7 358 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 ATP9BO43861 1147 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 E2F6O75461 281 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 KLHL2O95198 593 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 S100BP04271 92 aaPredicted RBP12.05□□□□□ -0.48
DDR1-232ENST00000418800 IL1R2P27930 398 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 SLC5A2P31639 672 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 TNFSF9P41273 254 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 PHKA2P46019 1235 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 DENND1BQ6P3S1 775 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 TRIM72Q6ZMU5 477 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 SNX32Q86XE0 403 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 SNX31Q8N9S9 440 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 CDKL2Q92772 493 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 APOL2Q9BQE5 337 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 MAF1Q9H063 256 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 IL1RL2Q9HB29 575 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 POLIQ9UNA4 740 aa12.05□□□□□ -0.48
DDR1-232ENST00000418800 TMEM191CA6NGB0 347 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 NR4A1P22736 598 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 PAX3P23760 479 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 MTA1Q13330 715 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 Q3C1V9 767 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 TMEM53Q6P2H8 277 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 GPR141Q7Z602 305 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 RNF135Q8IUD6 432 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 SULF1Q8IWU6 871 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 METTL25Q8N6Q8 603 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 FAM149B1Q96BN6 582 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 HBS1LQ9Y450 684 aaKnown RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 TELO2Q9Y4R8 837 aa12.04□□□□□ -0.48
DDR1-232ENST00000418800 ASTN2O75129 1339 aaPredicted RBP12.04□□□□□ -0.48
DDR1-232ENST00000418800 STX16-NPEPL1H3BU86 382 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms