RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 DNAJC12Q9UKB3 198 aa17.11■□□□□ 0.33
DDR1-231ENST00000417521 AJAP1Q9UKB5 411 aaPredicted RBP17.11■□□□□ 0.33
DDR1-231ENST00000417521 GMEB2Q9UKD1 530 aa17.11■□□□□ 0.33
DDR1-231ENST00000417521 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
DDR1-231ENST00000417521 STARD13Q9Y3M8 1113 aa17.11■□□□□ 0.33
DDR1-231ENST00000417521 PIK3R2O00459 728 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 PENKP01210 267 aaPredicted RBP17.1■□□□□ 0.33
DDR1-231ENST00000417521 USP8P40818 1118 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 HARS2P49590 506 aaKnown RBP17.1■□□□□ 0.33
DDR1-231ENST00000417521 DGKEP52429 567 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 UBASH3AP57075 661 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 NR1I3Q14994 352 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 EOGTQ5NDL2 527 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 DENND1BQ6P3S1 775 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 CEP68Q76N32 757 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 CCDC33Q8N5R6 958 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 ALLCQ8N6M5 410 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 MIS12Q9H081 205 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 ACP6Q9NPH0 428 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 ST7Q9NRC1 585 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 SFMBT1Q9UHJ3 866 aa17.1■□□□□ 0.33
DDR1-231ENST00000417521 CFAP54Q96N23 3096 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 TRIM24O15164 1050 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 RPP40O75818 363 aaKnown RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 RETP07949 1114 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 CISD3P0C7P0 127 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 DGKGP49619 791 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 PTK2Q05397 1052 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 C10orf76Q5T2E6 689 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 TRMT11Q7Z4G4 463 aaKnown RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 TMEM110Q86TL2 294 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 SCUBE3Q8IX30 993 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 FAM217AQ8IXS0 508 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 TXNDC5Q8NBS9 432 aaKnown RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 CLEC4CQ8WTT0 213 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 PCMTD1Q96MG8 357 aaPredicted RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 XPO4Q9C0E2 1151 aaKnown RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 FAM207AQ9NSI2 230 aaPredicted RBP17.09■□□□□ 0.33
DDR1-231ENST00000417521 STOML2Q9UJZ1 356 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 ZNF292O60281 2723 aa17.09■□□□□ 0.33
DDR1-231ENST00000417521 SGK1O00141 431 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 EPHB6O15197 1021 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 AP5Z1O43299 807 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 LATS1O95835 1130 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 CYBBP04839 570 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 LPAL2Q16609 132 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 BEND5Q7L4P6 421 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 CACNA2D4Q7Z3S7 1137 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 RASSF3Q86WH2 238 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 KIAA2013Q8IYS2 634 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.32
DDR1-231ENST00000417521 P2RY11Q96G91 374 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 PLK2Q9NYY3 685 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 CYTH4Q9UIA0 394 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 PCDHGC3Q9UN70 934 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 SLC27A6Q9Y2P4 619 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 FHOD1Q9Y613 1164 aa17.08■□□□□ 0.32
DDR1-231ENST00000417521 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.32
DDR1-231ENST00000417521 FOXN3O00409 490 aaPredicted RBP17.07■□□□□ 0.32
DDR1-231ENST00000417521 ALDH1A2O94788 518 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 BPIFB4P59827 614 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 RING1Q06587 406 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 UNC45BQ8IWX7 931 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 FAM71AQ8IYT1 594 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 BHMTQ93088 406 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 GANQ9H2C0 597 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 POLMQ9NP87 494 aaPredicted RBP17.07■□□□□ 0.32
DDR1-231ENST00000417521 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 FANCMQ8IYD8 2048 aa17.07■□□□□ 0.32
DDR1-231ENST00000417521 PAPSS1O43252 624 aaPredicted RBP17.06■□□□□ 0.32
DDR1-231ENST00000417521 MSI1O43347 362 aaKnown RBP17.06■□□□□ 0.32
DDR1-231ENST00000417521 LRP3O75074 770 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 ADAM23O75077 832 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 IGLV3-27P01718 113 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 FYNP06241 537 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 NCAM1P13591 858 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 UCHL3P15374 230 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 CLCN1P35523 988 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 PDCLQ13371 301 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 MPPE1Q53F39 396 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 ADGRF1Q5T601 910 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 NUGGCQ68CJ6 796 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 TOGARAM2Q6ZUX3 1019 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.06■□□□□ 0.32
DDR1-231ENST00000417521 WDTC1Q8N5D0 677 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 FAM160A2Q8N612 972 aaPredicted RBP17.06■□□□□ 0.32
DDR1-231ENST00000417521 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 LOXL4Q96JB6 756 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 ZC3H10Q96K80 434 aaKnown RBP17.06■□□□□ 0.32
DDR1-231ENST00000417521 SLC2A11Q9BYW1 496 aa17.06■□□□□ 0.32
DDR1-231ENST00000417521 IRX2Q9BZI1 471 aaPredicted RBP17.06■□□□□ 0.32
DDR1-231ENST00000417521 HCN2Q9UL51 889 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms