RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 DIABLOQ9NR28 239 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ARHGEF3Q9NR81 526 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 TPP1O14773 563 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 DDX5P17844 614 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 CYP24A1Q07973 514 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 TRAF3Q13114 568 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 MTFR1Q15390 333 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 PAN2Q504Q3 1202 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 TRIM39Q9HCM9 518 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 THAP1Q9NVV9 213 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 KLHL20Q9Y2M5 609 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 IQSEC2Q5JU85 1478 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ATXN2Q99700 1313 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBR4-205ENST00000417040 MPOP05164 745 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ALOX15P16050 662 aaPredicted RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 PDK3Q15120 406 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 FAM98BQ52LJ0 330 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 TRIQKQ629K1 86 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 C11orf88Q6PI97 169 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 APBA2Q99767 749 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 KLHL1Q9NR64 748 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 ACOT9Q9Y305 439 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 C2orf81A6NN90 581 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ADCY6O43306 1168 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ZNF37AP17032 561 aaPredicted RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 IL12RB1P42701 662 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 NR1D2Q14995 579 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 PDK2Q15119 407 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 FIGNQ5HY92 759 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 CEP44Q9C0F1 390 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 MID1IP1Q9NPA3 183 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ZMYND8Q9ULU4 1186 aaPredicted RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 AAR2Q9Y312 384 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 GNG14A0A1W2PPG7 69 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ASB14A6NK59 587 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 SLC26A4O43511 780 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 STAU1O95793 577 aaKnown RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 HK2P52789 917 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 NCF4Q15080 339 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 NR6A1Q15406 480 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 SCARA3Q6AZY7 606 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 MIB1Q86YT6 1006 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 RNPEPL1Q9HAU8 725 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 PADI4Q9UM07 663 aa12.35□□□□□ -0.43
UBR4-205ENST00000417040 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
UBR4-205ENST00000417040 IQCA1LA6NCM1 817 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 SERPINE1P05121 402 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 BRINP3Q76B58 766 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ZNF720Q7Z2F6 126 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 FNDC5Q8NAU1 212 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 MAGEE2Q8TD90 523 aaPredicted RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 DEPDC7Q96QD5 511 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ATXN3LQ9H3M9 355 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ZNF70Q9UC06 446 aaPredicted RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 TMCC3Q9ULS5 477 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 PRR23AA6NEV1 266 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 MRASO14807 208 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 VPS26AO75436 327 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 RPS6KA5O75582 802 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ERVK-10P10266 1014 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 BFSP2Q13515 415 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 PDIA6Q15084 440 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ERLEC1Q96DZ1 483 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 RPRD1AQ96P16 312 aaPredicted RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 KLHL3Q9UH77 587 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 LOC100506127A0A0U1RQW1 187 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 CCDC130P13994 396 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ANPEPP15144 967 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ST13P50502 369 aaKnown RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 CCNG1P51959 295 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 SNRPFP62306 86 aaKnown RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 XRCC4Q13426 336 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 MRNIPQ6NTE8 343 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 KCNMB4Q86W47 210 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 EID3Q8N140 333 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 RIT2Q99578 217 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 TBC1D10AQ9BXI6 508 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 NCKIPSDQ9NZQ3 722 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 NDUFAF1Q9Y375 327 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 TULP4Q9NRJ4 1543 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 MFSD7Q6UXD7 560 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 EPHX4Q8IUS5 362 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 GLIS3Q8NEA6 775 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 SPPL2AQ8TCT8 520 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms