RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 ITPK1Q13572 414 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 GEN1Q17RS7 908 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 CD300EQ496F6 205 aaPredicted RBP7.55□□□□□ -1.2
LINC00343-202ENST00000415294 ARHGAP15Q53QZ3 475 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 CCDC70Q6NSX1 233 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 CTU1Q7Z7A3 348 aaKnown RBP7.55□□□□□ -1.2
LINC00343-202ENST00000415294 NRSN1Q8IZ57 195 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00343-202ENST00000415294 DNAJB14Q8TBM8 379 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 OTUD7AQ8TE49 926 aaPredicted RBP7.55□□□□□ -1.2
LINC00343-202ENST00000415294 FAM136AQ96C01 138 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 MYEOVQ96EZ4 313 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 LOXL4Q96JB6 756 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 TRIM36Q9NQ86 728 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 VPS51Q9UID3 782 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 MRPS17Q9Y2R5 130 aaKnown RBP7.55□□□□□ -1.2
LINC00343-202ENST00000415294 FER1L6Q2WGJ9 1857 aa7.55□□□□□ -1.2
LINC00343-202ENST00000415294 M0R3H8 397 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 MUSKO15146 869 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 ASNA1O43681 348 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 SNX2O60749 519 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 NCR1O76036 304 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 PEX11BO96011 259 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 PECAM1P16284 738 aaPredicted RBP7.54□□□□□ -1.2
LINC00343-202ENST00000415294 EPHX2P34913 555 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 DDR1Q08345 913 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 RESTQ13127 1097 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 NFIXQ14938 502 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 POSTNQ15063 836 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 TEDDM1Q5T9Z0 273 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 TTC30AQ86WT1 665 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 RASGRP3Q8IV61 690 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 BDH2Q9BUT1 245 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 SORBS1Q9BX66 1292 aaKnown RBP7.54□□□□□ -1.2
LINC00343-202ENST00000415294 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
LINC00343-202ENST00000415294 KLC2Q9H0B6 622 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 GBA2Q9HCG7 927 aaPredicted RBP7.54□□□□□ -1.2
LINC00343-202ENST00000415294 SAYSD1Q9NPB0 183 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 SSX2IPQ9Y2D8 614 aa7.54□□□□□ -1.2
LINC00343-202ENST00000415294 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
LINC00343-202ENST00000415294 ZFPL1O95159 310 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 SRGNP10124 158 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 LAG3P18627 525 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 PGDP52209 483 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 ITIH3Q06033 890 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 EFR3AQ14156 821 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 CLCA4Q14CN2 919 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 ABLIM2Q6H8Q1 611 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 KLHL17Q6TDP4 642 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 CYP26C1Q6V0L0 522 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 PAF1Q8N7H5 531 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 SPPL3Q8TCT6 385 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 OSCP1Q8WVF1 389 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 NACC2Q96BF6 587 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 GRAMD1AQ96CP6 724 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 ZSCAN31Q96LW9 406 aaPredicted RBP7.53□□□□□ -1.2
LINC00343-202ENST00000415294 UNKLQ9H9P5 680 aaKnown RBP7.53□□□□□ -1.2
LINC00343-202ENST00000415294 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC00343-202ENST00000415294 HACL1Q9UJ83 578 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 NFU1Q9UMS0 254 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
LINC00343-202ENST00000415294 HS3ST4Q9Y661 456 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 TTC21BQ7Z4L5 1316 aa7.53□□□□□ -1.2
LINC00343-202ENST00000415294 A0A0G2JLL6 359 aaPredicted RBP7.52□□□□□ -1.2
LINC00343-202ENST00000415294 TMEM200CA6NKL6 621 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 TNFRSF6BO95407 300 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 ARP10275 920 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 HOXA5P20719 270 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 CST5P28325 142 aaPredicted RBP7.52□□□□□ -1.2
LINC00343-202ENST00000415294 RBL1P28749 1068 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 UQCRC1P31930 480 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 GATMP50440 423 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 FAM189BP81408 668 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 PTCHD3Q3KNS1 767 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 ADCK5Q3MIX3 580 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 ATPAF1Q5TC12 328 aaPredicted RBP7.52□□□□□ -1.2
LINC00343-202ENST00000415294 VPS53Q5VIR6 699 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 LIN54Q6MZP7 749 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 JMJD6Q6NYC1 403 aaPredicted RBP7.52□□□□□ -1.2
LINC00343-202ENST00000415294 DTX2Q86UW9 622 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 ABRAQ8N0Z2 381 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 ZNF276Q8N554 614 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 CPEB3Q8NE35 698 aaKnown RBP7.52□□□□□ -1.2
LINC00343-202ENST00000415294 HIST1H2AAQ96QV6 131 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 RTKNQ9BST9 563 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 FAM167BQ9BTA0 163 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 DDX23Q9BUQ8 820 aaKnown RBP7.52□□□□□ -1.2
LINC00343-202ENST00000415294 AMBRA1Q9C0C7 1298 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 MAF1Q9H063 256 aa7.52□□□□□ -1.2
LINC00343-202ENST00000415294 COL15A1P39059 1388 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 IPO5O00410 1097 aaKnown RBP7.52□□□□□ -1.21
LINC00343-202ENST00000415294 PCDH17O14917 1159 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 NDUFA10O95299 355 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 RFC4P35249 363 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 ZEB1P37275 1124 aaPredicted RBP7.52□□□□□ -1.21
LINC00343-202ENST00000415294 MTHFSP49914 203 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 NXPH1P58417 271 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 FBXO47Q5MNV8 452 aa7.52□□□□□ -1.21
LINC00343-202ENST00000415294 ZNF585AQ6P3V2 769 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms