RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 BFSP2Q13515 415 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 KCNB1Q14721 858 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 ELF2Q15723 593 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 LIN54Q6MZP7 749 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 CCDC174Q6PII3 467 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 VSTM1Q6UX27 236 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 DCDC5Q6ZRR9 648 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 CHSY1Q86X52 802 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 SLC44A2Q8IWA5 706 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 NKAPQ8N5F7 415 aaKnown RBP4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF398Q8TD17 642 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 HIC2Q96JB3 615 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 ASB2Q96Q27 587 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 EIF3CQ99613 913 aaKnown RBP4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 RTKNQ9BST9 563 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 MAGEH1Q9H213 219 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 PRDM8Q9NQV8 689 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 LRFN1Q9P244 771 aa4.39□□□□□ -1.71
HMGB1P11-201ENST00000413899 LOC105369274A0A096LPK9 316 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 LOC102723532A0A0G2JNH3 316 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 CLIC1O00299 241 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 TRIM38O00635 465 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 FCHO1O14526 889 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 TPD52L2O43399 206 aaKnown RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 RBMXL2O75526 392 aaKnown RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 CER1O95813 267 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 LATS1O95835 1130 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 KLRK1P26718 216 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 TUBA4AP68366 448 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 RAE1P78406 368 aaKnown RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 SLC10A2Q12908 348 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 MFSD13AQ14CX5 517 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 ATPAF1Q5TC12 328 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 PRAMEF17Q5VTA0 474 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 TMEM65Q6PI78 240 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 SERPINA13PQ6UXR4 307 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 DNAJC10Q8IXB1 793 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 OR4N4Q8N0Y3 316 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 OTUD7AQ8TE49 926 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 PNISRQ8TF01 805 aaKnown RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 SLC22A17Q8WUG5 538 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 TRAPPC12Q8WVT3 735 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 NPIPB3Q92617 1050 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 P2RY11Q96G91 374 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 LTV1Q96GA3 475 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF764Q96H86 408 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 DDX23Q9BUQ8 820 aaKnown RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 TMEM120AQ9BXJ8 343 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 ADGRE3Q9BY15 652 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 PABPC3Q9H361 631 aaKnown RBP4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 CDCP1Q9H5V8 836 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 ABHD10Q9NUJ1 306 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 FBXO28Q9NVF7 368 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 GRHPRQ9UBQ7 328 aa4.38□□□□□ -1.71
HMGB1P11-201ENST00000413899 SMIM22K7EJ46 135 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 FYB1O15117 783 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 NKX2-8O15522 239 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 GCATO75600 419 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 RPP40O75818 363 aaKnown RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 ACTL6BO94805 426 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 LARGE1O95461 756 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 ALADP13716 330 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 FBLP22087 321 aaKnown RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 NANOS3P60323 173 aaKnown RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 WDR5P61964 334 aaKnown RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 CBFBQ13951 182 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 AAK1Q2M2I8 961 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 P3H1Q32P28 736 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 NFRKBQ6P4R8 1299 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 KRT27Q7Z3Y8 459 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 LAS2Q8IYD9 372 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 C8orf58Q8NAV2 365 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 MORC4Q8TE76 937 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 DPF1Q92782 380 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 FAR2Q96K12 515 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 HS6ST2Q96MM7 605 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 HERPUD2Q9BSE4 406 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 MAFFQ9ULX9 164 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 CNTN6Q9UQ52 1028 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZBTB1Q9Y2K1 713 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 PCDHB2Q9Y5E7 798 aa4.37□□□□□ -1.71
HMGB1P11-201ENST00000413899 MANSC4A6NHS7 340 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 EFCAB8A8MWE9 144 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 CYP2A6P11509 494 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 SFPQP23246 707 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 AP2B1P63010 937 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 KLHL17Q6TDP4 642 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 C16orf89Q6UX73 402 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF813Q6ZN06 617 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 RINLQ6ZS11 566 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 RAB11FIP2Q7L804 512 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 MYCT1Q8N699 235 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms