RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 CRTC1Q6UUV9 634 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 RBM44Q6ZP01 1051 aaKnown RBP2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 FAM57BQ71RH2 274 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 MEPCEQ7L2J0 689 aaKnown RBP2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 PELI3Q8N2H9 469 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 ACRBPQ8NEB7 543 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 PHKBQ93100 1093 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 SLC25A28Q96A46 364 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 IQCDQ96DY2 449 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 MARK4Q96L34 752 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 GATA5Q9BWX5 397 aaPredicted RBP2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 UNKQ9C0B0 810 aaKnown RBP2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 BTBD1Q9H0C5 482 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 NUP62CLQ9H1M0 184 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 SEMA4BQ9NPR2 832 aaPredicted RBP2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 GJB4Q9NTQ9 266 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 ABHD10Q9NUJ1 306 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 COG5Q9UP83 839 aa2.36□□□□□ -2.03
RNU2-54P-201ENST00000410299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 IGLV5-39A0A0G2JS06 123 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 RHPN2P1A8MT19 583 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 ZNF814B7Z6K7 855 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 SMAD6O43541 496 aaKnown RBP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 UGDHO60701 494 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 NDUFB8O95169 186 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 IL18RAPO95256 599 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 CBSLP0DN79 551 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 RPL17P18621 184 aaKnown RBP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 ATF3P18847 181 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 RPS6KB1P23443 525 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 NDUFS1P28331 727 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 CBSP35520 551 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 PIK3CBP42338 1070 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 DGKQP52824 942 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 B4GALNT1Q00973 533 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 BFSP2Q13515 415 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 DAG1Q14118 895 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 KCNJ12Q14500 433 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 MIDNQ504T8 468 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 TMEM196Q5HYL7 178 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 MANEAQ5SRI9 462 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 FAXCQ5TGI0 409 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 KIAA1161Q6NSJ0 714 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 KYAT3Q6YP21 454 aaKnown RBP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 KRT28Q7Z3Y7 464 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 KRT78Q8N1N4 520 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 ATP11CQ8NB49 1132 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 MPLKIPQ8TAP9 179 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 ABHD5Q8WTS1 349 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 AKAP1Q92667 903 aaKnown RBP eCLIP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 CELF1Q92879 486 aaKnown RBP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 MSI2Q96DH6 328 aaKnown RBP2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 P2RY11Q96G91 374 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 NLRP4Q96MN2 994 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 WDR24Q96S15 920 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 MLXIPQ9HAP2 919 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 ZBTB26Q9HCK0 441 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 PNPLA8Q9NP80 782 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 PRDM11Q9NQV5 511 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 MSRB1Q9NZV6 116 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 CNTNAP2Q9UHC6 1331 aa2.35□□□□□ -2.03
RNU2-54P-201ENST00000410299 TRBV5-3A0A0A0MS03 114 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 TMEM272A0A1B0GTI8 110 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 POM121BA6NF01 834 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 FAM90A8PA6NJQ4 464 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 FOXN3O00409 490 aaPredicted RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 AREL1O15033 823 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 KPNA5O15131 536 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 ZSCAN9O15535 394 aaPredicted RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 CCNT2O60583 730 aaKnown RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 PQBP1O60828 265 aaKnown RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 COQ9O75208 318 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 EPN2O95208 641 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 SLC3A2P08195 630 aaKnown RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 FAM90A13PP0C7W8 464 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 FAM90A24PP0C7X0 464 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 ALADP13716 330 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 MST1P26927 711 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 DUSP1P28562 367 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 HOXD12P35452 270 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 IGHMBP2P38935 993 aaKnown RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 IL6STP40189 918 aaPredicted RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 CDKN2AP42771 156 aaKnown RBP2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 SOX2P48431 317 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 AGTR2P50052 363 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 SLC12A2P55011 1212 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 ZNF543Q08ER8 600 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 SEMA3BQ13214 749 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 ERV3-1Q14264 604 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 SEMA3AQ14563 771 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 ELF2Q15723 593 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 PRTGQ2VWP7 1150 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 DAB2IPQ5VWQ8 1189 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 FAM90A2PQ658T7 463 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 RAP1GAP2Q684P5 730 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 NUGGCQ68CJ6 796 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 KIAA0408Q6ZU52 694 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 RFX6Q8HWS3 928 aa2.34□□□□□ -2.03
RNU2-54P-201ENST00000410299 WDR75Q8IWA0 830 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms