RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 CPNE1Q99829 537 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 PHF20Q9BVI0 1012 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 NRDE2Q9H7Z3 1164 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 TBC1D13Q9NVG8 400 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 ARHGAP28Q9P2N2 729 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 DSEQ9UL01 958 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 IL12AP29459 219 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 DGKDQ16760 1214 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 PROX1Q92786 737 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 KLHL1Q9NR64 748 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 NDUFAF1Q9Y375 327 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 FAM92AA1XBS5 289 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 MAPK11Q15759 364 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 GOLGA7BQ2TAP0 167 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ARHGAP15Q53QZ3 475 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 WDCPQ9H6R7 721 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 RRN3Q9NYV6 651 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 CHORDC1Q9UHD1 332 aaPredicted RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 SRRM3A6NNA2 597 aaPredicted RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 AGKQ53H12 422 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 C8orf59Q8N0T1 100 aaPredicted RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 DHRSXQ8N5I4 330 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 USP33Q8TEY7 942 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 C2orf69Q8N8R5 385 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 FBXO36Q8NEA4 188 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 CHID1Q9BWS9 393 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 PRKD2Q9BZL6 878 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 TMEM216Q9P0N5 145 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 RPS6KA6Q9UK32 745 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 PLA2G6O60733 806 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 PGM3O95394 542 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 NEDD8Q15843 81 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 FIGNQ5HY92 759 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 PAPD7Q5XG87 772 aaKnown RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 FAM220AQ7Z4H9 259 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 APOPT1Q96IL0 206 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 IRGMA1A4Y4 181 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 INPP4BO15327 924 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 SASH1O94885 1247 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 SYTL1Q8IYJ3 562 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 UXS1Q8NBZ7 420 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ZNF671Q8TAW3 534 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 NLNQ9BYT8 704 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 METTL5Q9NRN9 209 aaKnown RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ANKEF1Q9NU02 776 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 KCNK4Q9NYG8 393 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ROR2Q01974 943 aaKnown RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 TTLL6Q8N841 843 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 EIF1ADQ8N9N8 165 aaKnown RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ADCY6O43306 1168 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 RAD17O75943 681 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 VAV1P15498 845 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 CUL2Q13617 745 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 ABRAXAS1Q6UWZ7 409 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 POLR1BQ9H9Y6 1135 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 CROTQ9UKG9 612 aa12.45□□□□□ -0.42
SHANK2-203ENST00000409161 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
SHANK2-203ENST00000409161 GLP2RO95838 553 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 CPA3P15088 417 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 DNAJB2P25686 324 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 GPSM2P81274 684 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-203ENST00000409161 RUNDC3AQ59EK9 446 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 CLVS1Q8IUQ0 354 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-203ENST00000409161 CCDC28BQ9BUN5 200 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 SLC25A23Q9BV35 468 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 EHD3Q9NZN3 535 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 NAGPAQ9UK23 515 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 AFF2P51816 1311 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 EMC2Q15006 297 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 TAF8Q7Z7C8 310 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 DEPDC4Q8N2C3 294 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 SLC25A41Q8N5S1 370 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 RERGLQ9H628 205 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 RPL26L1Q9UNX3 145 aaKnown RBP12.44□□□□□ -0.42
SHANK2-203ENST00000409161 H3BN98 237 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 GRIK3Q13003 919 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 QPRTQ15274 297 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 ATF7IP2Q5U623 682 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 ZNF112Q9UJU3 913 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 CAPGP40121 348 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 FASTKQ14296 549 aaKnown RBP12.44□□□□□ -0.42
SHANK2-203ENST00000409161 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-203ENST00000409161 ROGDIQ9GZN7 287 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 REEP1Q9H902 201 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 USP18Q9UMW8 372 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 DNAJC16Q9Y2G8 782 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 TDP2O95551 362 aa12.44□□□□□ -0.42
SHANK2-203ENST00000409161 EPB42P16452 691 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms