RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PDCD6IPQ8WUM4 868 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CHAC2Q8WUX2 184 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TFB1MQ8WVM0 346 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CRYGNQ8WXF5 182 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 S100ZQ8WXG8 99 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 USP6NLQ92738 828 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TMIGD2Q96BF3 282 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TAMM41Q96BW9 452 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 LRRC39Q96DD0 335 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MRRFQ96E11 262 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DYNLL2Q96FJ2 89 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KREMEN1Q96MU8 473 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PHF12Q96QT6 1004 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ACCSQ96QU6 501 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 WRNIP1Q96S55 665 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CSRNP1Q96S65 589 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ZNF347Q96SE7 839 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 YME1L1Q96TA2 773 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KLF6Q99612 283 aaPredicted RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PKP2Q99959 881 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SENP7Q9BQF6 1050 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EIF2AK1Q9BQI3 630 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EBF4Q9BQW3 602 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 WDR83Q9BRX9 315 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TMEM79Q9BSE2 394 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EFHD1Q9BUP0 239 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 APOL6Q9BWW8 343 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 OSBPL10Q9BXB5 764 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NPLQ9BXD5 320 aaPredicted RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HEMGNQ9BXL5 484 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 WDR12Q9GZL7 423 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TMEM117Q9H0C3 514 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C12orf65Q9H3J6 166 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ST6GALNAC4Q9H4F1 302 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EHD1Q9H4M9 534 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TUT1Q9H6E5 874 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RMND5AQ9H871 391 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CAAP1Q9H8G2 361 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 VRTNQ9H8Y1 702 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PSTPIP2Q9H939 334 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 JMJD4Q9H9V9 463 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GPN2Q9H9Y4 310 aaPredicted RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 LIN28AQ9H9Z2 209 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 UGT1A7Q9HAW7 530 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 UGT1A10Q9HAW8 530 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 UGT1A8Q9HAW9 530 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 VAT1LQ9HCJ6 419 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TMEM8AQ9HCN3 771 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ALG13Q9NP73 1137 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CD320Q9NPF0 282 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MAN1C1Q9NR34 630 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HOMER2Q9NSB8 354 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GINM1Q9NU53 330 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 OLAHQ9NV23 265 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MRGBPQ9NV56 204 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 PARVAQ9NVD7 372 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ANKMY1Q9P2S6 941 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 EBF1Q9UH73 591 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DCDC2Q9UHG0 476 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 XPO7Q9UIA9 1087 aaKnown RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DOLKQ9UPQ8 538 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SATB2Q9UPW6 733 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 DNAJC16Q9Y2G8 782 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SPO11Q9Y5K1 396 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 NOX1Q9Y5S8 564 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CPQQ9Y646 472 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CROCCQ5TZA2 2017 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 COL5A3P25940 1745 aaPredicted RBP3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 QSER1Q2KHR3 1735 aa3.18□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 COL4A1P02462 1669 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 WDR81Q562E7 1941 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 COL5A2P05997 1499 aaPredicted RBP3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SIPA1L1O43166 1804 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 SIP14410 1827 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 IGKV6D-41A0A0C4DH26 115 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MYOCOSA0A1B0GUC4 107 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 C7orf72A4D263 438 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ANKRD34BA5PLL1 514 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 FAM172BPA6NC97 362 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 LRRIQ4A6NIV6 560 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 GOLGA8CPA6NN73 597 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TBKBP1A7MCY6 615 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 CLDN25C9JDP6 229 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KBTBD13C9JR72 458 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 H3BMQ9 156 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RNF103O00237 685 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 MEIS1O00470 390 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TRIM38O00635 465 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 ACOT8O14734 319 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 XPO1O14980 1071 aaKnown RBP3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TLR3O15455 904 aaKnown RBP3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 HTRA2O43464 458 aaPredicted RBP3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 AKAP10O43572 662 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 KLHL41O60662 606 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 H2AFYO75367 372 aaKnown RBP3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TADA2AO75478 443 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 BANF1O75531 89 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 TOM1L1O75674 476 aa3.17□□□□□ -1.9
RNU6ATAC40P-201ENST00000408580 RFPL1O75677 317 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms