RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LRRTM3Q86VH5 581 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 TDRPQ86YL5 185 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 ADAM32Q8TC27 787 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 LINC01599Q8WXQ3 324 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 FAM107BQ9H098 131 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 FKTNO75072 461 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 GCATO75600 419 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 ATP2A2P16615 1042 aaKnown RBP25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 TADA2BQ86TJ2 420 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 ZNF280BQ86YH2 543 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 CCDC110Q8TBZ0 833 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 TFB1MQ8WVM0 346 aaKnown RBP25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 NTAN1Q96AB6 310 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 FRMD8Q9BZ67 464 aaPredicted RBP25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 KCNK9Q9NPC2 374 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 DDIT4Q9NX09 232 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 KANSL3Q9P2N6 904 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 MFHAS1Q9Y4C4 1052 aa25.54■■□□□ 1.68
DNMT3A-206ENST00000406659 CLUHO75153 1309 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 EEF2KO00418 725 aaKnown RBP25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 DGKIO75912 1065 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 DDHD2O94830 711 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 F9P00740 461 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 TSHRP16473 764 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 APLP1P51693 650 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 YWHAHQ04917 246 aaPredicted RBP25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 NR1H3Q13133 447 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 SYCP2LQ5T4T6 812 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 HEATR6Q6AI08 1181 aaKnown RBP25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 PM20D1Q6GTS8 502 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 C3orf62Q6ZUJ4 267 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 CTU1Q7Z7A3 348 aaKnown RBP25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 SPATA2LQ8IUW3 424 aaPredicted RBP25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 CCDC33Q8N5R6 958 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 PGAP3Q96FM1 320 aaPredicted RBP25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 FTHL17Q9BXU8 183 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 EURLQ9NYK6 297 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 FBXW11Q9UKB1 542 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 PHF24Q9UPV7 400 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 FRMPD3Q5JV73 1810 aa25.53■■□□□ 1.68
DNMT3A-206ENST00000406659 GCAP28676 217 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 ARL13BQ3SXY8 428 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 C4orf50Q6ZRC1 276 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 LRRC8DQ7L1W4 858 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 BHLHA9Q7RTU4 235 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 ATXN2LQ8WWM7 1075 aaKnown RBP25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 MAML1Q92585 1016 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 EDEM1Q92611 657 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 FAM193BQ96PV7 902 aaPredicted RBP25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 ETNK1Q9HBU6 452 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 WDR6Q9NNW5 1121 aaKnown RBP25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.52■■□□□ 1.681e-6■■■■□ 22.7
DNMT3A-206ENST00000406659 SLC24A2Q9UI40 661 aa25.52■■□□□ 1.68
DNMT3A-206ENST00000406659 TMEM120BA0PK00 339 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 C5orf60A6NFR6 353 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 FOXO6A8MYZ6 492 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 BRAFP15056 766 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 SELPP16109 830 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 SSTR1P30872 391 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 OR1G1P47890 313 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 DSC1Q08554 894 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 MTM1Q13496 603 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 FAM182AQ5T1J6 154 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 FAXCQ5TGI0 409 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 VPS52Q8N1B4 723 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 SCML4Q8N228 414 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 OLFM3Q96PB7 478 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 PNPLA8Q9NP80 782 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 RABGEF1Q9UJ41 708 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 ACTL7BQ9Y614 415 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 B4GALT3O60512 393 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 CREB1P16220 341 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 PRMT2P55345 433 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 SCAPQ12770 1279 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 BSPRYQ5W0U4 402 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 VSTM1Q6UX27 236 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 ARHGEF18Q6ZSZ5 1173 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 RFX8Q6ZV50 586 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 SRRM1Q8IYB3 904 aaKnown RBP25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 FERMT1Q9BQL6 677 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 WDR83Q9BRX9 315 aaKnown RBP25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 CHMP2BQ9UQN3 213 aa25.51■■□□□ 1.67
DNMT3A-206ENST00000406659 RASA4BC9J798 803 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 RASA4O43374 803 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 MFSD11O43934 449 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 ELK3P41970 407 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 MAGEA6P43360 314 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 GEMIN4P57678 1058 aaKnown RBP25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 COLGALT2Q8IYK4 626 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 HTR3CQ8WXA8 447 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 TRIM62Q9BVG3 475 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 TBC1D13Q9NVG8 400 aa25.5■■□□□ 1.67
DNMT3A-206ENST00000406659 SF3B1O75533 1304 aaKnown RBP eCLIP25.5■■□□□ 1.676e-8■■■■■ 166.4
DNMT3A-206ENST00000406659 STK10O94804 968 aaKnown RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 APRTP07741 180 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 VEGFBP49765 207 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 DPYSQ14117 519 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 PAFAH1B3Q15102 231 aaKnown RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 PDK1Q15118 436 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 KLHL38Q2WGJ6 581 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms