RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 DYNLL1P63167 89 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 GTF2IP78347 998 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 GSTM4Q03013 218 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TNK2Q07912 1038 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CSTF3Q12996 717 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PPP2R5DQ14738 602 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SCYL2Q6P3W7 929 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ZDHHC24Q6UX98 284 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 LRRC55Q6ZSA7 311 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 RAB43Q86YS6 212 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 COLGALT2Q8IYK4 626 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PIK3R3Q92569 461 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 NCLNQ969V3 563 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 VPS33AQ96AX1 596 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CCDC17Q96LX7 622 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SLC25A23Q9BV35 468 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 KLHL3Q9UH77 587 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PPLO60437 1756 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 APOL1O14791 398 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FAM189A1O60320 539 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SNX2O60749 519 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 YES1P07947 543 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CDK4P11802 303 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TFDP3Q5H9I0 405 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 KCNT1Q5JUK3 1230 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 WDR45BQ5MNZ6 344 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FAM91A1Q658Y4 838 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SLC2A7Q6PXP3 512 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 Q6ZNX1 250 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TTC7BQ86TV6 843 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ZNF410Q86VK4 478 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SNX32Q86XE0 403 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ASCC1Q8N9N2 400 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 RBBP8Q99708 897 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 MTG1Q9BT17 334 aaPredicted RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 BBS2Q9BXC9 721 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FBXO6Q9NRD1 293 aaPredicted RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 VPS4AQ9UN37 437 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ING4Q9UNL4 249 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ANKRD6Q9Y2G4 727 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 AFG3L2Q9Y4W6 797 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CD163L1Q9NR16 1453 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SFI1A8K8P3 1242 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 H3BSA7 217 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CYP1A2P05177 515 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 KRT20P35900 424 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SLC26A3P40879 764 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 GCLMP48507 274 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TUBP50607 506 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 THOP1P52888 689 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CHRNB3Q05901 458 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SPIRE1Q08AE8 756 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ALYREFQ86V81 257 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FEZF2Q8TBJ5 459 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 KLHL32Q96NJ5 620 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 IRF2BPLQ9H1B7 796 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SUCOQ9UBS9 1254 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TTLL3Q9Y4R7 772 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 GNB5O14775 395 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SLC22A1O15245 554 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CLPXO76031 633 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 ASS1P00966 412 aaKnown RBP10.24□□□□□ -0.77
PTPRM-203ENST00000400060 GH1P01241 217 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 NAT1P18440 290 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FOXN2P32314 431 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CCT8P50990 548 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CCNYL2Q5T2Q4 361 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FAM102BQ5T8I3 360 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SLFN12LQ6IEE8 588 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 C16orf46Q6P387 395 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 P3H2Q8IVL5 708 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 PGAM4Q8N0Y7 254 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 CCNYL1Q8N7R7 359 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 DNAAF3Q8N9W5 541 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 FAM47BQ8NA70 645 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 VCPIP1Q96JH7 1222 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 NLRP4Q96MN2 994 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 YME1L1Q96TA2 773 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 HEPHQ9BQS7 1158 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 AMNQ9BXJ7 453 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 BFARQ9NZS9 450 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 SLC7A8Q9UHI5 535 aa10.24□□□□□ -0.77
PTPRM-203ENST00000400060 TTC34A8MYJ7 566 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 TNPO2O14787 897 aaKnown RBP10.23□□□□□ -0.77
PTPRM-203ENST00000400060 GNA15P30679 374 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 GTF2H1P32780 548 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 CHKAP35790 457 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 SLC9A3P48764 834 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 NRF1Q16656 503 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 DGKDQ16760 1214 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 CYP4V2Q6ZWL3 525 aaPredicted RBP10.23□□□□□ -0.77
PTPRM-203ENST00000400060 AADATQ8N5Z0 425 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 PSMA8Q8TAA3 256 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 OTULINQ96BN8 352 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 SNAPC5O75971 98 aa10.23□□□□□ -0.77
PTPRM-203ENST00000400060 IL1BP01584 269 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms