RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 HIST1H2AJQ99878 128 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 H2AFJQ9BTM1 129 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SYNDIG1Q9H7V2 258 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 GPBP1L1Q9HC44 474 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 PTPRHQ9HD43 1115 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ZNF212Q9UDV6 495 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DDX20Q9UHI6 824 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 DOLKQ9UPQ8 538 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 VWA8A3KMH1 1905 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 LOC102724159A0A0B4J2E5 919 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 FAM95CA0A1B0GW59 222 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 F5H5T6 163 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 H3BQF6 201 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ZCCHC18P0CG32 403 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 KCNA3P22001 575 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 AMPD1P23109 780 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SOAT1P35610 550 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ATP6V1E1P36543 226 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 FDFT1P37268 417 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MLH1P40692 756 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 LHX1P48742 406 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 COPAP53621 1224 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RPL7AP62424 266 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 PDK2Q15119 407 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PWP2Q15269 919 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 FAM171A1Q5VUB5 890 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PLEKHH3Q7Z736 793 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CARNMT1Q8N4J0 409 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CALML6Q8TD86 181 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 HES6Q96HZ4 224 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 WDR18Q9BV38 432 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TEX12Q9BXU0 123 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ADGRE3Q9BY15 652 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 KIAA1683Q9H0B3 1180 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DNAJC5Q9H3Z4 198 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ABHD16BQ9H3Z7 469 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ZNF556Q9HAH1 456 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 GBA2Q9HCG7 927 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 TEKT2Q9UIF3 430 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PCDHA3Q9Y5H8 950 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ARHGAP23Q9P227 1491 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C5orf42Q9H799 3197 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 E5RJQ4 531 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 E9PBE3 544 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 GRIN3BO60391 1043 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 KLHL41O60662 606 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 PLA2G6O60733 806 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SHBGP04278 402 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TPH1P17752 444 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MIPP30301 263 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DSG3P32926 999 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RGS2P41220 211 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SLC1A6P48664 564 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C1QBPQ07021 282 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 MPP3Q13368 585 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 GTF2H3Q13889 308 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TRIP10Q15642 601 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DNAL1Q4LDG9 190 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ABRAQ8N0Z2 381 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RAB42Q8N4Z0 105 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ATP6V0D2Q8N8Y2 350 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ZNF555Q8NEP9 628 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TCP10LQ8TDR4 215 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 LRRN4Q8WUT4 740 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TUBGCP3Q96CW5 907 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MTBPQ96DY7 904 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CDCA5Q96FF9 252 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C10orf88Q9H8K7 445 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RXFP1Q9HBX9 757 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 BLOC1S4Q9NUP1 217 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DLGAP2Q9P1A6 1054 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 XIRP2A4UGR9 3374 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SPDYE5A6NIY4 337 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 F8VP50 259 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RIPK2O43353 540 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 HMGCRP04035 888 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 HNRNPCP07910 306 aaKnown RBP eCLIP3.35□□□□□ -1.87
KNL1-202ENST00000399668 UBTFL6P0CB48 400 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 MGAT1P26572 445 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CCR1P32246 355 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 RPA3P35244 121 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 OCA2Q04671 838 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MED21Q13503 144 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ACVR2BQ13705 512 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 LAMB3Q13751 1172 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DDX39BQ13838 428 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 INPP5AQ14642 412 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CCNG2Q16589 344 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SPDYE7PQ495Y7 208 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CYB5D1Q6P9G0 228 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 CXCL17Q6UXB2 119 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 C11orf74Q86VG3 221 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TDRD5Q8NAT2 981 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 TSEN2Q8NCE0 465 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 SPATA20Q8TB22 786 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 SLC2A14Q8TDB8 520 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 DDI1Q8WTU0 396 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 GTF3C2Q8WUA4 911 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 FAM162AQ96A26 154 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms