RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 KIAA0391O15091 583 aaKnown RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 CST8O60676 142 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PRG2P13727 222 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 UCHL3P15374 230 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 CNTFP26441 200 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 SLC1A6P48664 564 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PYHIN1Q6K0P9 492 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 HAUS6Q7Z4H7 955 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 CASKIN2Q8WXE0 1202 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 OSBP2Q969R2 916 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 HOXC10Q9NYD6 342 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 LIMD1Q9UGP4 676 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 BAIAP2Q9UQB8 552 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 EFR3BQ9Y2G0 817 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 SLCO1B7G3V0H7 640 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PDXKO00764 312 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 NMT2O60551 498 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 TCAIMQ8N3R3 496 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 S100ZQ8WXG8 99 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ANAPC2Q9UJX6 822 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 CLUP10909 449 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 GJA8P48165 433 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 MINDY2Q8NBR6 621 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 OR52L1Q8NGH7 329 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 EPB41L1Q9H4G0 881 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 GJB4Q9NTQ9 266 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 R3HCC1LQ7Z5L2 792 aaKnown RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PALB2Q86YC2 1186 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ZDHHC13Q8IUH4 622 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 BHMTQ93088 406 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 MYDGFQ969H8 173 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 SYNPO2Q9UMS6 1093 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ATP7BP35670 1465 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 RARBP10826 455 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 PABPC3Q9H361 631 aaKnown RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CAB39LQ9H9S4 337 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 DDX20Q9UHI6 824 aaKnown RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SNX9Q9Y5X1 595 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SNX4O95219 450 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 BGNP21810 368 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TOB2Q14106 344 aaPredicted RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 YME1L1Q96TA2 773 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 MLXQ9UH92 298 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 RBP1P09455 135 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 RASA1P20936 1047 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SLC26A3P40879 764 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CHN2P52757 468 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SLC34A1Q06495 639 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 NRF1Q16656 503 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 ERFEQ4G0M1 354 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CAMKK1Q8N5S9 505 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SLC20A1Q8WUM9 679 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TMEM237Q96Q45 408 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 BHLHE41Q9C0J9 482 aaPredicted RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SLC2A3P11169 496 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 MAPK7Q13164 816 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 MAD2L1Q13257 205 aaPredicted RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TUBA3CQ13748 450 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 FASTKQ14296 549 aaKnown RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 GRM4Q14833 912 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 ATP13A5Q4VNC0 1218 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 PERM1Q5SV97 790 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SMYD1Q8NB12 490 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 GAL3ST3Q96A11 431 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TIPINQ9BVW5 301 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 AAR2Q9Y312 384 aaKnown RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 PTCH1Q13635 1447 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TTC3P53804 2025 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 LRRC14BA6NHZ5 514 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 TSPAN4O14817 238 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 HAT1O14929 419 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 KATNA1O75449 491 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 ATP4AP20648 1035 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 PTGS2P35354 604 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 MFSD14CQ5VZR4 134 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 MSANTD1Q6ZTZ1 278 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 C8orf59Q8N0T1 100 aaPredicted RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 FNDC5Q8NAU1 212 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 ITFG1Q8TB96 612 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 USP7Q93009 1102 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 COX4I2Q96KJ9 171 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
COL4A4-201ENST00000396625 USP21Q9UK80 565 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 MAGI2Q86UL8 1455 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 NEK5Q6P3R8 708 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 FBXO36Q8NEA4 188 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 NSMCE2Q96MF7 247 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 AGAP1Q9UPQ3 857 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CDHR2Q9BYE9 1310 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CES2O00748 559 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 RPS6KA5O75582 802 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms