RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PKN1Q16512 942 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 FAM136AQ96C01 138 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 NUAK2Q9H093 628 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 ENTPD7Q9NQZ7 604 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 AGPAT3Q9NRZ7 376 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 GLI2P10070 1586 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 KBTBD13C9JR72 458 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 VPS4BO75351 444 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 NPTXRO95502 500 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 CCNA2P20248 432 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 TGFBR2P37173 567 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 PRKAA1Q13131 559 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 GRTP1Q5TC63 336 aa14.33□□□□□ -0.12
COL4A3-202ENST00000396578 CCDC182A6NF36 153 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 RCVRNP35243 200 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 LGALS3BPQ08380 585 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 RGS21Q2M5E4 152 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 AKIRIN2Q53H80 203 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 DDI2Q5TDH0 399 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 FNDC5Q8NAU1 212 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 ZNF483Q8TF39 744 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 A0A0A6YYK5 440 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 FAM205CA6NFA0 338 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 SYNCRIPO60506 623 aaKnown RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 C15orf41Q9Y2V0 281 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 GARTP22102 1010 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 LTKP29376 864 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 PBLDP30039 288 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 CSHL1Q14406 222 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 ANKRD6Q9Y2G4 727 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 RPS6KA4O75676 772 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 SLC2A4P14672 509 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 PHACTR4Q8IZ21 702 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 MXRA8Q9BRK3 442 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 LIMD1Q9UGP4 676 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 HALP42357 657 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 ALDH9A1P49189 494 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 BAATQ14032 418 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 AMHR2Q16671 573 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 OXNAD1Q96HP4 312 aaPredicted RBP14.32□□□□□ -0.12
COL4A3-202ENST00000396578 ACOX2Q99424 681 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 DPY30Q9C005 99 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 AHCYL1O43865 530 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 GSSP48637 474 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 C2CD6Q53TS8 623 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 PDCD10Q9BUL8 212 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 L2HGDHQ9H9P8 463 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 CHKBQ9Y259 395 aa14.32□□□□□ -0.12
COL4A3-202ENST00000396578 BCLAF3A2AJT9 711 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ERI2A8K979 691 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 NCAM2O15394 837 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 SGPL1O95470 568 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 LRG1P02750 347 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 CYP11B1P15538 503 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 SFSWAPQ12872 951 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 MZT2AQ6P582 158 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 CBWD2Q8IUF1 395 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 RNF145Q96MT1 663 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 RPRD1AQ96P16 312 aaPredicted RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ACTR8Q9H981 624 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 SH3GLB1Q9Y371 365 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 PREX2Q70Z35 1606 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 A0A087X0T9 212 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 FAM228BP0C875 321 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TRIM32Q13049 653 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ITGADQ13349 1161 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 MYBPC2Q14324 1141 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ZNF671Q8TAW3 534 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ATP8B4Q8TF62 1192 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ADPRHL2Q9NX46 363 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ETAA1Q9NY74 926 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TRPM5Q9NZQ8 1165 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 HBP1O60381 514 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 AP1G2O75843 785 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 MAP3K6O95382 1288 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 VAV1P15498 845 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 HPCAL1P37235 193 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 PRCCQ92733 491 aaPredicted RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TMEM237Q96Q45 408 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 RIBC2Q9H4K1 309 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TRIM39Q9HCM9 518 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TSPAN9O75954 239 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 CAPSLQ8WWF8 208 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ATXN2LQ8WWM7 1075 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 NSUN4Q96CB9 384 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 HECW2Q9P2P5 1572 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 KATNA1O75449 491 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TNFRSF21O75509 655 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 UPP2O95045 317 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 FOXO4P98177 505 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 PAPD7Q5XG87 772 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 TTC27Q6P3X3 843 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 S100A13Q99584 98 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms