RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 EDEM1Q92611 657 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 LOXL4Q96JB6 756 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 PPP1R13BQ96KQ4 1090 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 SIX2Q9NPC8 291 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 LIMA1Q9UHB6 759 aaKnown RBP20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 FBXO10Q9UK96 956 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 SMG5Q9UPR3 1016 aaKnown RBP20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 PAXBP1Q9Y5B6 917 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 VPS13AQ96RL7 3174 aa20.15■□□□□ 0.82
CDKN1B-202ENST00000396340 RALGAPA1Q6GYQ0 2036 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 MDM4O15151 490 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 HSF2BPO75031 334 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 TPM4P67936 248 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 TYRO3Q06418 890 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 SIM2Q14190 667 aaPredicted RBP20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 CRY1Q16526 586 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 USP39Q53GS9 565 aaKnown RBP20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 HSP90AA4PQ58FG1 418 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 C10orf76Q5T2E6 689 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 CEP68Q76N32 757 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 PHTF2Q8N3S3 785 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 ZNF513Q8N8E2 541 aaPredicted RBP20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 DDI1Q8WTU0 396 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 GAB3Q8WWW8 586 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 SPAG5Q96R06 1193 aa20.14■□□□□ 0.81
CDKN1B-202ENST00000396340 AXIN1O15169 862 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 IGLV3-27P01718 113 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 APOEP02649 317 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 KLKB1P03952 638 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 SCNN1AP37088 669 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 KIR2DL1P43626 348 aaPredicted RBP20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 TBX4P57082 545 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 KLHL40Q2TBA0 621 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 FILIP1LQ4L180 1135 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 DENND1BQ6P3S1 775 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 GJB7Q6PEY0 223 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 C11orf57Q6ZUT1 292 aaPredicted RBP20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 CACNA2D4Q7Z3S7 1137 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 NAT16Q8N8M0 369 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 TMA16Q96EY4 203 aaKnown RBP20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 NAA15Q9BXJ9 866 aaKnown RBP20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 VPS16Q9H269 839 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 TAB2Q9NYJ8 693 aa20.13■□□□□ 0.81
CDKN1B-202ENST00000396340 E5RJQ4 531 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 SCAMP3O14828 347 aaKnown RBP20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 RPP40O75818 363 aaKnown RBP20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 HMBSP08397 361 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 HNRNPLP14866 589 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 CYP11B1P15538 503 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 NTSR1P30989 418 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 CLCN1P35523 988 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 SLC6A11P48066 632 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 FNTBP49356 437 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 CDK17Q00537 523 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 KDSRQ06136 332 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 KCNMA1Q12791 1236 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 IL17RCQ8NAC3 791 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 NEK11Q8NG66 645 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 LSM14BQ9BX40 385 aaKnown RBP20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 SFMBT1Q9UHJ3 866 aa20.12■□□□□ 0.81
CDKN1B-202ENST00000396340 USP34Q70CQ2 3546 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 LGALS16A8MUM7 142 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 F8VZ95 297 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 RHOBTB1O94844 696 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 RETP07949 1114 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 CDH5P33151 784 aaPredicted RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 TIE1P35590 1138 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 COPB1P53618 953 aaKnown RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 SEC13P55735 322 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 ARID5AQ03989 594 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 ELF2Q15723 593 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 FYB2Q5VWT5 728 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 PPP1R2P3Q6NXS1 205 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 TRIM72Q6ZMU5 477 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 ANKS1BQ7Z6G8 1248 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 SLC47A2Q86VL8 602 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 RASSF3Q86WH2 238 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 C12orf40Q86WS4 652 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 TXNDC5Q8NBS9 432 aaKnown RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 WFIKKN2Q8TEU8 576 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 EZH1Q92800 747 aaPredicted RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 ZC3H10Q96K80 434 aaKnown RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 BTN2A3PQ96KV6 586 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 SPACA7Q96KW9 195 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 PCMTD1Q96MG8 357 aaPredicted RBP20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 ERGIC2Q96RQ1 377 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 PPP1R9BQ96SB3 815 aa20.11■□□□□ 0.81
CDKN1B-202ENST00000396340 PAPSS1O43252 624 aaPredicted RBP20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 KLF8O95600 359 aaPredicted RBP20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 ZNF18P17022 549 aa20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 STAT1P42224 750 aa20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 DPP6P42658 865 aa20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 UBXN1Q04323 297 aa20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 SYCP1Q15431 976 aa20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 SPDYCQ5MJ68 293 aa20.1■□□□□ 0.81
CDKN1B-202ENST00000396340 HEATR6Q6AI08 1181 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms