RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SLC1A1P43005 524 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 RGS7P49802 495 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 SLC6A3Q01959 620 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 MESDQ14696 234 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 CTXN3Q4LDR2 81 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 RAB41Q5JT25 222 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 RTP2Q5QGT7 225 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 LCE2AQ5TA79 106 aaPredicted RBP11.95□□□□□ -0.5
RTN1-203ENST00000395090 ZNF280DQ6N043 979 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 OLFML1Q6UWY5 402 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 C4orf50Q6ZRC1 276 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 DDX53Q86TM3 631 aaKnown RBP11.95□□□□□ -0.5
RTN1-203ENST00000395090 CEP57Q86XR8 500 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 HERC6Q8IVU3 1022 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 GPR65Q8IYL9 337 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 COLGALT1Q8NBJ5 622 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 DPF3Q92784 378 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 CD101Q93033 1021 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 MYLPFQ96A32 169 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 FUBP3Q96I24 572 aaKnown RBP eCLIP11.95□□□□□ -0.5
RTN1-203ENST00000395090 KCNK16Q96T55 309 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 RAD9AQ99638 391 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
RTN1-203ENST00000395090 PNPLA8Q9NP80 782 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 PRDM6Q9NQX0 595 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 SPG21Q9NZD8 308 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 ZMYND8Q9ULU4 1186 aaPredicted RBP11.95□□□□□ -0.5
RTN1-203ENST00000395090 BACE2Q9Y5Z0 518 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
RTN1-203ENST00000395090 VWA8A3KMH1 1905 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 GJB6O95452 261 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 SOD2P04179 222 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 TCP1P17987 556 aaKnown RBP11.94□□□□□ -0.5
RTN1-203ENST00000395090 EPHA1P21709 976 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 COMTP21964 271 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 CACNA2D1P54289 1103 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 OGDHQ02218 1023 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 PCDH1Q08174 1060 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 SMARCB1Q12824 385 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 GPR17Q13304 367 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 SPOUT1Q5T280 376 aaKnown RBP11.94□□□□□ -0.5
RTN1-203ENST00000395090 SLC8B1Q6J4K2 584 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 DCUN1D2Q6PH85 259 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 RSPO2Q6UXX9 243 aaPredicted RBP11.94□□□□□ -0.5
RTN1-203ENST00000395090 FAM183BPQ6ZVS7 135 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 NIPA2Q8N8Q9 360 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 B3GALT6Q96L58 329 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 SELENOOQ9BVL4 669 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 STK39Q9UEW8 545 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
RTN1-203ENST00000395090 MIF4GDA9UHW6 222 aaKnown RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 CES2O00748 559 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 NCK2O43639 380 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 BDNFP23560 247 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PPM1AP35813 382 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 MAGEA11P43364 429 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PEX5P50542 639 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 MAP3K7CLP57077 242 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 DSG1Q02413 1049 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 ADCY1Q08828 1119 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 ZNF252P-AS1Q0IIN9 211 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PIGHQ14442 188 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 ACAP1Q15027 740 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 OR6B2Q6IFH4 312 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 SLC26A9Q7LBE3 791 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 SPATA2LQ8IUW3 424 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 SCML4Q8N228 414 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 FIBCD1Q8N539 461 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 TMEM169Q96HH4 297 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 MCEEQ96PE7 176 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 OSBPL9Q96SU4 736 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 DMAP1Q9NPF5 467 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 GPN3Q9UHW5 284 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 GGT7Q9UJ14 662 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PCDHA3Q9Y5H8 950 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 C2CD4BA6NLJ0 364 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 PIK3R2O00459 728 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 DDX3YO15523 660 aaKnown RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 OR4Q2P0C623 313 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 CYP2F1P24903 491 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 CTNNA2P26232 953 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 ZNF143P52747 638 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 TERF1P54274 439 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 TAF5Q15542 800 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 WHAMMP3Q1A5X7 153 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 SLC39A12Q504Y0 691 aa11.93□□□□□ -0.5
RTN1-203ENST00000395090 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
RTN1-203ENST00000395090 PM20D1Q6GTS8 502 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms