RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 PRPF39Q86UA1 669 aaKnown RBP16.08■□□□□ 0.16
PTBP1-204ENST00000394601 ANKRD13AQ8IZ07 590 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 SH3TC2Q8TF17 1288 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 FAF2Q96CS3 445 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 RMI1Q9H9A7 625 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 CYP4F11Q9HBI6 524 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 DPP3Q9NY33 737 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 FAM155BO75949 473 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 ZNF286BP0CG31 522 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 MAGEA6P43360 314 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 LPCAT4Q643R3 524 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 PCDH19Q8TAB3 1148 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 TCP10LQ8TDR4 215 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 MRPL45Q9BRJ2 306 aaKnown RBP16.08■□□□□ 0.16
PTBP1-204ENST00000394601 CALN1Q9BXU9 219 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 SLC4A5Q9BY07 1137 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 FAM124BQ9H5Z6 455 aaPredicted RBP16.08■□□□□ 0.16
PTBP1-204ENST00000394601 DMAP1Q9NPF5 467 aaPredicted RBP16.08■□□□□ 0.16
PTBP1-204ENST00000394601 CNTN3Q9P232 1028 aa16.08■□□□□ 0.16
PTBP1-204ENST00000394601 GRAP2O75791 330 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 ZWINTO95229 277 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 HOXA11P31270 313 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 CDH6P55285 790 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 SLC18A2Q05940 514 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 R3HDM1Q15032 1099 aaKnown RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 CAND1Q86VP6 1230 aaKnown RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 SLC35F5Q8WV83 523 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 SYNCQ9H7C4 482 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 TROVE2P10155 538 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■□□□ 11.7
PTBP1-204ENST00000394601 STIP1P31948 543 aaKnown RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 PDE1CQ14123 709 aaPredicted RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 GRAMD1BQ3KR37 738 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 CLNKQ7Z7G1 428 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 TMEM110Q86TL2 294 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 SHKBP1Q8TBC3 707 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 SLC44A1Q8WWI5 657 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 MPHOSPH6Q99547 160 aaKnown RBP16.07■□□□□ 0.16
PTBP1-204ENST00000394601 CENPKQ9BS16 269 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 MAGEB5Q9BZ81 275 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 PNPLA8Q9NP80 782 aa16.07■□□□□ 0.16
PTBP1-204ENST00000394601 MCF2LO15068 1137 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PDGFRAP16234 1089 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 MAGEA3P43357 314 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 MAP7Q14244 749 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 ZNF534Q76KX8 674 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
PTBP1-204ENST00000394601 RILPQ96NA2 401 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 LPIN3Q9BQK8 851 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 SPATA16Q9BXB7 569 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 KCNK13Q9HB14 408 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 GTF2IRD1Q9UHL9 959 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 TTLL3Q9Y4R7 772 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 AK5Q9Y6K8 562 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 CHADO15335 359 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 SERPINB6P35237 376 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 HDAC4P56524 1084 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 ROR1Q01973 937 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 KLHL38Q2WGJ6 581 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 BBS9Q3SYG4 887 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 KBTBD12Q3ZCT8 623 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 SHCBP1Q8NEM2 672 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 SLC26A7Q8TE54 656 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 FAM136AQ96C01 138 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 CDCA5Q96FF9 252 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 SUDS3Q9H7L9 328 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PCDH18Q9HCL0 1135 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PPARGC1AQ9UBK2 798 aaKnown RBP16.06■□□□□ 0.16
PTBP1-204ENST00000394601 GSC2O15499 205 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PAPSS1O43252 624 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-204ENST00000394601 CCDC22O60826 627 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 CYP2C8P10632 490 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 HOXD8P13378 290 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PHBP35232 272 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 LAMC2Q13753 1193 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PARP6Q2NL67 630 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 LIN52Q52LA3 116 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 PAOXQ6QHF9 649 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 C7orf31Q8N865 590 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 MIPOL1Q8TD10 442 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 LRRN4Q8WUT4 740 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 AFG1LQ8WV93 481 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 YIPF2Q9BWQ6 316 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
PTBP1-204ENST00000394601 COL1A2P08123 1366 aa16.05■□□□□ 0.16
PTBP1-204ENST00000394601 RPL34P49207 117 aaKnown RBP16.05■□□□□ 0.16
PTBP1-204ENST00000394601 ARFIP2P53365 341 aa16.05■□□□□ 0.16
PTBP1-204ENST00000394601 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
PTBP1-204ENST00000394601 BASP1P80723 227 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms