RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SOX4Q06945 474 aaPredicted RBP20.24■□□□□ 0.83
RCCD1-201ENST00000394258 DENND5BQ6ZUT9 1274 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 TTC7BQ86TV6 843 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 UNC5BQ8IZJ1 945 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 LRRC52Q8N7C0 313 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 INPP5DQ92835 1189 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 LGMNQ99538 433 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 TMEM120AQ9BXJ8 343 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 ABHD16BQ9H3Z7 469 aa20.24■□□□□ 0.83
RCCD1-201ENST00000394258 CLDN5O00501 218 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 DHRS4L1P0CG22 281 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 ACAT1P24752 427 aaKnown RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 INHBEP58166 350 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 SARNPP82979 210 aaKnown RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 MROH9Q5TGP6 573 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 TTC39BQ5VTQ0 682 aaPredicted RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 BSPRYQ5W0U4 402 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 TRIM55Q9BYV6 548 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 TOP3BO95985 862 aaKnown RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 CSH1P0DML2 217 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 CSH2P0DML3 217 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 DARSP14868 501 aaKnown RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 TKTP29401 623 aaKnown RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 ARFIP2P53365 341 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 BCAT1P54687 386 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 SLC18A2Q05940 514 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 DPYSL2Q16555 572 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 ANKRD20A2Q5SQ80 823 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 THEMIS2Q5TEJ8 643 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 ANKRD20A1Q5TYW2 823 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 ANKRD20A3Q5VUR7 823 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 CES4AQ5XG92 561 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 SLC26A9Q7LBE3 791 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 UNC93AQ86WB7 457 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 CDKL3Q8IVW4 592 aaPredicted RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 DENND2DQ9H6A0 471 aaPredicted RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 DTLQ9NZJ0 730 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 UBQLN1Q9UMX0 589 aaKnown RBP20.23■□□□□ 0.83
RCCD1-201ENST00000394258 DERAQ9Y315 318 aa20.23■□□□□ 0.83
RCCD1-201ENST00000394258 CCDC195A0A1B0GUA6 201 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 FAM237BA0A1B0GVD1 139 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 CYB561D2O14569 222 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 SPAG6O75602 509 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 SNX16P57768 344 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 PRKD1Q15139 912 aaPredicted RBP20.22■□□□□ 0.83
RCCD1-201ENST00000394258 ARHGAP17Q68EM7 881 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 ALKAL1Q6UXT8 129 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 ZNF534Q76KX8 674 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
RCCD1-201ENST00000394258 KRT37O76014 449 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 APOEP02649 317 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 SNRPAP09012 282 aaKnown RBP20.22■□□□□ 0.83
RCCD1-201ENST00000394258 PTPN9P43378 593 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 SERPINB4P48594 390 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 IRX1P78414 480 aaPredicted RBP20.22■□□□□ 0.83
RCCD1-201ENST00000394258 DCAF6Q58WW2 860 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 HEATR6Q6AI08 1181 aaKnown RBP20.22■□□□□ 0.83
RCCD1-201ENST00000394258 CASC4Q6P4E1 433 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 DEFB106AQ8N104 65 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 APPL2Q8NEU8 664 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 RNF217Q8TC41 542 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 STK32AQ8WU08 396 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 SLC5A4Q9NY91 659 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 SLC17A6Q9P2U8 582 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 DOCK3Q8IZD9 2030 aa20.22■□□□□ 0.83
RCCD1-201ENST00000394258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 RRN3P2A6NIE6 340 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 ADIGQ0VDE8 80 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 APBB1IPQ7Z5R6 666 aaPredicted RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 ZDHHC17Q8IUH5 632 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 SPDYE1Q8NFV5 336 aaPredicted RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 SIGLEC10Q96LC7 697 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.21■□□□□ 0.837e-6■■■■□ 21.6
RCCD1-201ENST00000394258 ARMCX1Q9P291 453 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 PIRO00625 290 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 TREHO43280 583 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 BEST1O76090 585 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 PTPN4P29074 926 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 ABL2P42684 1182 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 NDUFV1P49821 464 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 IRX4P78413 519 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 NCBP2-AS2Q69YL0 99 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 PIGZQ86VD9 579 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 NUDCD1Q96RS6 583 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 CADM1Q9BY67 442 aaKnown RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 FAM124BQ9H5Z6 455 aaPredicted RBP20.21■□□□□ 0.83
RCCD1-201ENST00000394258 SPON1Q9HCB6 807 aa20.21■□□□□ 0.83
RCCD1-201ENST00000394258 DLDP09622 509 aaKnown RBP20.2■□□□□ 0.82
RCCD1-201ENST00000394258 VAV1P15498 845 aa20.2■□□□□ 0.82
RCCD1-201ENST00000394258 SULT1E1P49888 294 aa20.2■□□□□ 0.82
RCCD1-201ENST00000394258 MRPS5P82675 430 aaKnown RBP20.2■□□□□ 0.82
RCCD1-201ENST00000394258 ZBTB16Q05516 673 aa20.2■□□□□ 0.82
RCCD1-201ENST00000394258 GRB14Q14449 540 aa20.2■□□□□ 0.82
RCCD1-201ENST00000394258 GTF3C2Q8WUA4 911 aaPredicted RBP20.2■□□□□ 0.82
RCCD1-201ENST00000394258 CENPIQ92674 756 aaPredicted RBP20.2■□□□□ 0.82
RCCD1-201ENST00000394258 USP6NLQ92738 828 aa20.2■□□□□ 0.82
RCCD1-201ENST00000394258 RNPEPL1Q9HAU8 725 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms