RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 NDFIP2Q9NV92 336 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 CLUHO75153 1309 aa10.53□□□□□ -0.72
LTN1-203ENST00000389195 KBTBD13C9JR72 458 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 UGT1A9O60656 530 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 LTFP02788 710 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 NUDT17P0C025 328 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 GMPRP36959 345 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 MDH1P40925 334 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 ELK3P41970 407 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 SLC5A3P53794 718 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 PPP2R2AP63151 447 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 GRIK3Q13003 919 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 HIF1AQ16665 826 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 EFHC1Q5JVL4 640 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 RWDD4Q6NW29 188 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 LRIG3Q6UXM1 1119 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 C3orf62Q6ZUJ4 267 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 PRPF39Q86UA1 669 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 TAC4Q86UU9 113 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 MAP7D3Q8IWC1 876 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 COLGALT2Q8IYK4 626 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 ZCCHC9Q8N567 271 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 NAT8LQ8N9F0 302 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 USP33Q8TEY7 942 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 RNF139Q8WU17 664 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 SMARCD1Q96GM5 515 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 FAM193BQ96PV7 902 aaPredicted RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 PRMT1Q99873 361 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 PAIP2Q9BPZ3 127 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 APOL2Q9BQE5 337 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 UGT1A7Q9HAW7 530 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 UGT1A10Q9HAW8 530 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 UGT1A8Q9HAW9 530 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 WDR6Q9NNW5 1121 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 UBN1Q9NPG3 1134 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 FZD10Q9ULW2 581 aa10.52□□□□□ -0.72
LTN1-203ENST00000389195 DRG1Q9Y295 367 aaKnown RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.72
LTN1-203ENST00000389195 HMGB1P1B2RPK0 211 aaPredicted RBP10.52□□□□□ -0.73
LTN1-203ENST00000389195 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 GIPC2Q8TF65 315 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 ARHGEF2Q92974 986 aaKnown RBP10.52□□□□□ -0.73
LTN1-203ENST00000389195 PCDH9Q9HC56 1237 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 GGT7Q9UJ14 662 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 CDH9Q9ULB4 789 aa10.52□□□□□ -0.73
LTN1-203ENST00000389195 EXOC1LA0A1B0GW35 172 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 TBKBP1A7MCY6 615 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 DPYSL4O14531 572 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 EIF3HO15372 352 aaKnown RBP eCLIP10.51□□□□□ -0.73
LTN1-203ENST00000389195 ITGB8P26012 769 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 NOS2P35228 1153 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PTPN9P43378 593 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PKN2Q16513 984 aaKnown RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 DPYSL2Q16555 572 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 RTP2Q5QGT7 225 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 KDM7AQ6ZMT4 941 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 RPAINQ86UA6 219 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 METTL23Q86XA0 190 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 MIB1Q86YT6 1006 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 SPATA2LQ8IUW3 424 aaPredicted RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 PNPLA1Q8N8W4 532 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PXYLP1Q8TE99 480 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PYROXD1Q8WU10 500 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 AUTS2Q8WXX7 1259 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.51□□□□□ -0.73
LTN1-203ENST00000389195 CASP10Q92851 521 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PGBD4Q96DM1 585 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PRDM12Q9H4Q4 367 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 MPP6Q9NZW5 540 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PRDM4Q9UKN5 801 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 A0A1W2PQH9 124 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 TTC24A2A3L6 582 aaPredicted RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PCSK1P29120 753 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 PTPN7P35236 360 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 RPL34P49207 117 aaKnown RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 PGGT1BP53609 377 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 TRIM60Q495X7 471 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 SLC9A4Q6AI14 798 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 FAM171BQ6P995 826 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 RUNDC3BQ96NL0 473 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 SEPT5Q99719 369 aaPredicted RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 COLEC11Q9BWP8 271 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 WDCPQ9H6R7 721 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 ALG13Q9NP73 1137 aaKnown RBP10.51□□□□□ -0.73
LTN1-203ENST00000389195 OR12D3Q9UGF7 316 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 PCDHB7Q9Y5E2 793 aa10.51□□□□□ -0.73
LTN1-203ENST00000389195 MYO9BQ13459 2157 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 E2F8A0AVK6 867 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 EEF2KO00418 725 aaKnown RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 SELPP16109 830 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 ERCC2P18074 760 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms