RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 ZNF81P51508 661 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 JAK3P52333 1124 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 KCNB1Q14721 858 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TRIM60Q495X7 471 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 MAP9Q49MG5 647 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TMEM196Q5HYL7 178 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 EARS2Q5JPH6 523 aaKnown RBP2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 C10orf25Q5T742 122 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 IL31Q6EBC2 164 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCDC144NLQ6NUI1 221 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 MSANTD2Q6P1R3 559 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TMEM65Q6PI78 240 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TXLNBQ8N3L3 684 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM71DQ8N9W8 422 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 OR52L2PQ8NGH6 319 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 SMG7Q92540 1137 aaKnown RBP2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 KIAA1191Q96A73 305 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 EID2BQ96D98 161 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TMEM41AQ96HV5 264 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 DOCK7Q96N67 2140 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 SIGLEC11Q96RL6 698 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 EFHD1Q9BUP0 239 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TTLL2Q9BWV7 592 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 MLXIPLQ9NP71 852 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 NLRC4Q9NPP4 1024 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 NRIP3Q9NQ35 241 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 FSCN3Q9NQT6 498 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 PDGFCQ9NRA1 345 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TUBA8Q9NY65 449 aaPredicted RBP2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TAF1P21675 1872 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 LOC105369274A0A096LPK9 316 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 LOC102723532A0A0G2JNH3 316 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 WDR91A4D1P6 747 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 PRYO14603 147 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 RRHO14718 337 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 PCDH17O14917 1159 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ANXA6P08133 673 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 MYL3P08590 195 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ITGA5P08648 1049 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 CTSAP10619 480 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 NPPBP16860 134 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 IGFBP2P18065 325 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 TACR3P29371 465 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 PTGER1P34995 402 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 IDUAP35475 653 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 SOX2P48431 317 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 NEK3P51956 506 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 WDR5P61964 334 aaKnown RBP2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 DMWDQ09019 674 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 SEMA3BQ13214 749 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 KLF9Q13886 244 aaPredicted RBP2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ANO7Q6IWH7 933 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 MIS18BP1Q6P0N0 1132 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 TFAP2DQ7Z6R9 452 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM186BQ8IYM0 893 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 OR4N4Q8N0Y3 316 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 EXD3Q8N9H8 876 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 OSR1Q8TAX0 266 aaPredicted RBP2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ASB12Q8WXK4 309 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZNF566Q969W8 418 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZFYVE19Q96K21 471 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 TNIP3Q96KP6 325 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ELAC2Q9BQ52 826 aaKnown RBP2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 SH2D3AQ9BRG2 576 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 ADGRE3Q9BY15 652 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 NUAK2Q9H093 628 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 TP63Q9H3D4 680 aaPredicted RBP2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 CDCP1Q9H5V8 836 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 USP29Q9HBJ7 922 aa2.69□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCDC187A0A096LP49 1063 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 LY6G6EA0A0G2JKS1 128 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 PODXLO00592 558 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 PPEF2O14830 753 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 NPC1O15118 1278 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 NKX2-8O15522 239 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZSCAN9O15535 394 aaPredicted RBP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 TAF5LO75529 589 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 FGBP02675 491 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 HMGB1P09429 215 aaKnown RBP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 RPS6KB1P23443 525 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 SERPINB3P29508 390 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 IL6STP40189 918 aaPredicted RBP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 NR4A2P43354 598 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 RPS13P62277 151 aaKnown RBP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 RAE1P78406 368 aaKnown RBP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 GHRHRQ02643 423 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 GAB1Q13480 694 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 PTK2BQ14289 1009 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM110CQ1W6H9 321 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 ARHGAP15Q53QZ3 475 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 AWAT1Q58HT5 328 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 SRLQ86TD4 932 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 RFX6Q8HWS3 928 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 RASGRP3Q8IV61 690 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 DENND1AQ8TEH3 1009 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 PARD3BQ8TEW8 1205 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 VCPIP1Q96JH7 1222 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 HS6ST2Q96MM7 605 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZNF48Q96MX3 618 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms