RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 PPM1NQ8N819 430 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 C7orf26Q96N11 449 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 IL17RBQ9NRM6 502 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 SEPT3Q9UH03 358 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 MAD2L2Q9UI95 211 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 RIMS3Q9UJD0 308 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 SPEF1Q9Y4P9 236 aa15.48■□□□□ 0.07
VLDLR-202ENST00000382099 COL1A1P02452 1464 aaPredicted RBP15.48■□□□□ 0.07
VLDLR-202ENST00000382099 ZNF839A8K0R7 811 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 IFITM2Q01629 132 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 GRIK5Q16478 980 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 ERFEQ4G0M1 354 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 LLGL2Q6P1M3 1020 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 RALGPS2Q86X27 583 aaPredicted RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 TFB1MQ8WVM0 346 aaKnown RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 COA7Q96BR5 231 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 RIOK1Q9BRS2 568 aaKnown RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 OLAHQ9NV23 265 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 TRPC5Q9UL62 973 aaPredicted RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 SLC8A2Q9UPR5 921 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 SLC27A5Q9Y2P5 690 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 SNX13Q9Y5W8 968 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 VDRP11473 427 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 HNRNPFP52597 415 aaKnown RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 RAD23AP54725 363 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 OCA2Q04671 838 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 PMS2P3Q13401 168 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 PHTF2Q8N3S3 785 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 ZNF384Q8TF68 577 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 DCAKDQ8WVC6 231 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 ALPK1Q96QP1 1244 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 CIB1Q99828 191 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 PPCSQ9HAB8 311 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 WDR70Q9NW82 654 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 ITGA11Q9UKX5 1188 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 DGKBQ9Y6T7 804 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 ILVBLA1L0T0 632 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 SPAG6O75602 509 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 HOXA7P31268 230 aaPredicted RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 BMPR2Q13873 1038 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 CEP78Q5JTW2 689 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 SLC10A5Q5PT55 438 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 FAM156AQ8NDB6 213 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 ZC3H15Q8WU90 426 aaKnown RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 CELF1Q92879 486 aaKnown RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 PPP1R36Q96LQ0 422 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 PIGSQ96S52 555 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 C1orf50Q9BV19 199 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 STN1Q9H668 368 aaKnown RBP15.47■□□□□ 0.07
VLDLR-202ENST00000382099 TRIM39Q9HCM9 518 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 CD209Q9NNX6 404 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
VLDLR-202ENST00000382099 UBAP1LF5GYI3 381 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 F5H6K3 240 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 CLOCKO15516 846 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 DHRS4L1P0CG22 281 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 CCNA2P20248 432 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 KLRC2P26717 231 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 SERPINB1P30740 379 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 SERPINB5P36952 375 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 THOP1P52888 689 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 BFSP2Q13515 415 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 COG2Q14746 738 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 OXA1LQ15070 435 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 LSM12Q3MHD2 195 aaKnown RBP15.46■□□□□ 0.07
VLDLR-202ENST00000382099 AKAP14Q86UN6 197 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 AGR3Q8TD06 166 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 ZNF486Q96H40 463 aaPredicted RBP15.46■□□□□ 0.07
VLDLR-202ENST00000382099 REEP2Q9BRK0 252 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 KLQ9UEF7 1012 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 PCDHB2Q9Y5E7 798 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 CACNA1SQ13698 1873 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 H7C0C1 242 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 EML1O00423 815 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 MFN2O95140 757 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 SLURP2P0DP57 97 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 BFSP1Q12934 665 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 EPC2Q52LR7 807 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 USP17L2Q6R6M4 530 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 CHST15Q7LFX5 561 aaPredicted RBP15.46■□□□□ 0.07
VLDLR-202ENST00000382099 SLC47A2Q86VL8 602 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 ARHGEF19Q8IW93 802 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.46■□□□□ 0.07
VLDLR-202ENST00000382099 TMEM121Q9BTD3 319 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 ACSS3Q9H6R3 686 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 MCM9Q9NXL9 1143 aa15.46■□□□□ 0.07
VLDLR-202ENST00000382099 PPP1R1BQ9UD71 204 aaPredicted RBP15.46■□□□□ 0.07
VLDLR-202ENST00000382099 GTPBP10A4D1E9 387 aaKnown RBP15.45■□□□□ 0.06
VLDLR-202ENST00000382099 ZBTB7AO95365 584 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 CALCAP01258 141 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 HPCAL1P37235 193 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 ARHGEF6Q15052 776 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 ANO4Q32M45 955 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 MGAT5BQ3V5L5 792 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 MSS51Q4VC12 460 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 CES4AQ5XG92 561 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 EEPD1Q7L9B9 569 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 SLC44A5Q8NCS7 719 aa15.45■□□□□ 0.06
VLDLR-202ENST00000382099 TANKQ92844 425 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms