RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TRIM16LQ309B1 348 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 GRTP1Q5TC63 336 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 IZUMO2Q6UXV1 221 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 PTAR1Q7Z6K3 402 aaPredicted RBP16.46■□□□□ 0.23
COL2A1-202ENST00000380518 SYNDIG1Q9H7V2 258 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 SLC25A13Q9UJS0 675 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 TRHDEQ9UKU6 1024 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ALDH1A2O94788 518 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 IFNA14P01570 189 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 RENBPP51606 427 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 CXCL9Q07325 125 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 POU6F1Q14863 301 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
COL2A1-202ENST00000380518 AENQ8WTP8 325 aaKnown RBP16.46■□□□□ 0.23
COL2A1-202ENST00000380518 VPS33AQ96AX1 596 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ANKRD27Q96NW4 1050 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ACTR8Q9H981 624 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 THAP1Q9NVV9 213 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 SNTG2Q9NY99 539 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 SPACA6W5XKT8 324 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ACAP1Q15027 740 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 WASHC2DQ5SRD0 308 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 TRIM48Q8IWZ4 208 aa16.46■□□□□ 0.23
COL2A1-202ENST00000380518 ERI2A8K979 691 aaKnown RBP16.46■□□□□ 0.22
COL2A1-202ENST00000380518 KPNA6O60684 536 aa16.46■□□□□ 0.22
COL2A1-202ENST00000380518 ENDOD1O94919 500 aa16.46■□□□□ 0.22
COL2A1-202ENST00000380518 NR6A1Q15406 480 aa16.46■□□□□ 0.22
COL2A1-202ENST00000380518 NDEL1Q9GZM8 345 aa16.46■□□□□ 0.22
COL2A1-202ENST00000380518 VTI1BQ9UEU0 232 aa16.46■□□□□ 0.22
COL2A1-202ENST00000380518 CBX4O00257 560 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 FCHO1O14526 889 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 CLPTM1O96005 669 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 PGAM1P18669 254 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 ATP6V1B2P21281 511 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 EIF4BP23588 611 aaKnown RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SSTR1P30872 391 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 NPY2RP49146 381 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 OAZ1P54368 228 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 BFSP2Q13515 415 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 PWP1Q13610 501 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 MAP4K3Q8IVH8 894 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 EPS8L2Q9H6S3 715 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 BAIAP3O94812 1187 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 FAM153BP0C7A2 387 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 CHI3L1P36222 383 aaPredicted RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SLC1A6P48664 564 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SCNN1BP51168 640 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 FAM153CQ494X1 144 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 OVOS1Q6IE37 1185 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SLC44A2Q8IWA5 706 aaPredicted RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 LZTR1Q8N653 840 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 GDF3Q9NR23 364 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 FAM153AQ9UHL3 310 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 DYRK1BQ9Y463 629 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 URODP06132 367 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SLC16A1P53985 500 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 OASLQ15646 514 aaKnown RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SLC27A1Q6PCB7 646 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 CREG2Q8IUH2 290 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 REPS2Q8NFH8 660 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 FAM120BQ96EK7 910 aaKnown RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SETD4Q9NVD3 440 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 KRT6AP02538 564 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 KRT6BP04259 564 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 KRT6CP48668 564 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 ADIGQ0VDE8 80 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SPDYCQ5MJ68 293 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SLC30A10Q6XR72 485 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 KCNMB4Q86W47 210 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 EIF1ADQ8N9N8 165 aaKnown RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 CELF6Q96J87 481 aaKnown RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 SIKE1Q9BRV8 207 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 WDR41Q9HAD4 459 aa16.45■□□□□ 0.22
COL2A1-202ENST00000380518 UTP6Q9NYH9 597 aaKnown RBP16.45■□□□□ 0.22
COL2A1-202ENST00000380518 GRIK4Q16099 956 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 CERKQ8TCT0 537 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 EDEM1Q92611 657 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 FAM163AQ96GL9 167 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 FBXO44Q9H4M3 255 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 COPS7BQ9H9Q2 264 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 KRT84Q9NSB2 600 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 LNPEPQ9UIQ6 1025 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 MEGF6O75095 1541 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 GNG14A0A1W2PPG7 69 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 RGS5O15539 181 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 RAMP2O60895 175 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 ATP6V1G2O95670 118 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 CRABP2P29373 138 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 SKIV2L2P42285 1042 aaKnown RBP16.44■□□□□ 0.22
COL2A1-202ENST00000380518 MTA1Q13330 715 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 SPANXN3Q5MJ09 141 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 RETSATQ6NUM9 610 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 TERB1Q8NA31 727 aa16.44■□□□□ 0.22
COL2A1-202ENST00000380518 CAMKK2Q96RR4 588 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms