RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 NID2Q14112 1375 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 OPLAHO14841 1288 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 ASMTLO95671 621 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 ABHD2P08910 425 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 AKAP5P24588 427 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 ACAT1P24752 427 aaKnown RBP11.6□□□□□ -0.55
RPGR-203ENST00000378505 DNAJB2P25686 324 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 MGAT1P26572 445 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 CD151P48509 253 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 NCKAP1LP55160 1127 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 FCGRTP55899 365 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 NOMO3P69849 1222 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 GTF2H3Q13889 308 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 CSHL1Q14406 222 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 NUDT18Q6ZVK8 323 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 TDRD5Q8NAT2 981 aaKnown RBP11.6□□□□□ -0.55
RPGR-203ENST00000378505 DNAJB3Q8WWF6 145 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 EDEM1Q92611 657 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 ART4Q93070 314 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 OXNAD1Q96HP4 312 aaPredicted RBP11.6□□□□□ -0.55
RPGR-203ENST00000378505 CEP41Q9BYV8 373 aa11.6□□□□□ -0.55
RPGR-203ENST00000378505 KANSL1LA0AUZ9 987 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 PPP1R11O60927 126 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 PSMA4P25789 261 aaKnown RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 PRKAA2P54646 552 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 EFEMP1Q12805 493 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CDH18Q13634 790 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 MARC1Q5VT66 337 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 C9orf131Q5VYM1 1079 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 BBS12Q6ZW61 710 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 UNC93AQ86WB7 457 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 TNIP2Q8NFZ5 429 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 VAT1Q99536 393 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CAAP1Q9H8G2 361 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 A0A096LPK6 155 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 WDR27A2RRH5 827 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 PRPF4O43172 522 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■■□ 22.4
RPGR-203ENST00000378505 CALCAP01258 141 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ALBP02768 609 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ATP5BP06576 529 aaKnown RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 ATP6V1B1P15313 513 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SERPINB3P29508 390 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SLC1A6P48664 564 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 RENBPP51606 427 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ZNF135P52742 658 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 SPANXN3Q5MJ09 141 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 OVOS1Q6IE37 1185 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SNX31Q8N9S9 440 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 FAM162AQ96A26 154 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SIKE1Q9BRV8 207 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 C17orf80Q9BSJ5 609 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 WWOXQ9NZC7 414 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CTNNAL1Q9UBT7 734 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 H7C4K7 107 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CRTAMO95727 393 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CDK7P50613 346 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SREBF2Q12772 1141 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 POU6F1Q14863 301 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CTXN3Q4LDR2 81 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ATP13A4Q4VNC1 1196 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 SLC45A4Q5BKX6 768 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 KYAT3Q6YP21 454 aaKnown RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 KYQ8NBH2 561 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 DTNBP1Q96EV8 351 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 CELF6Q96J87 481 aaKnown RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 GBA2Q9HCG7 927 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 PDGFCQ9NRA1 345 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 TIMM13Q9Y5L4 95 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 ASTN2O75129 1339 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 CASTOR2A6NHX0 329 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 LCA5LO95447 670 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 ZNF143P52747 638 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 NAB1Q13506 487 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 POLNQ7Z5Q5 900 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 DEFB107AQ8IZN7 70 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 OTUB1Q96FW1 271 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
RPGR-203ENST00000378505 THUMPD3Q9BV44 507 aaKnown RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 SAE1Q9UBE0 346 aaPredicted RBP11.59□□□□□ -0.55
RPGR-203ENST00000378505 CHADO15335 359 aa11.58□□□□□ -0.56
RPGR-203ENST00000378505 GLP2RO95838 553 aa11.58□□□□□ -0.56
RPGR-203ENST00000378505 ADORA2AP29274 412 aa11.58□□□□□ -0.56
RPGR-203ENST00000378505 PEX5P50542 639 aa11.58□□□□□ -0.56
RPGR-203ENST00000378505 OXCT1P55809 520 aa11.58□□□□□ -0.56
RPGR-203ENST00000378505 KCNMB4Q86W47 210 aa11.58□□□□□ -0.56
RPGR-203ENST00000378505 SLC22A9Q8IVM8 553 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms